Cutaneotrichosporon cavernicola: CcaHIS019_0205850
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Entry
CcaHIS019_0205850 CDS
T09540
Symbol
PRP28, CcaverHIS019_0205850
Name
(RefSeq) uncharacterized protein
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CcaHIS019_0205850 (PRP28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccac03041
]
CcaHIS019_0205850 (PRP28)
Enzymes [BR:
ccac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CcaHIS019_0205850 (PRP28)
Spliceosome [BR:
ccac03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CcaHIS019_0205850 (PRP28)
Complex C
U5 SnRNP specific factors
CcaHIS019_0205850 (PRP28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P-loop_SecA
ResIII
DDX23
Motif
Other DBs
NCBI-GeneID:
85493094
NCBI-ProteinID:
XP_060454489
UniProt:
A0AA48IIH6
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Position
2:complement(join(1503264..1505279,1505313..1505381))
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AA seq
694 aa
AA seq
DB search
MSGPLSVEDILAQQKAEREAAAKPKFMTKAMREKLAAEKAAADSSSTKEKERGDRARREG
LERAAAEERRRADVNRRDRERERDTRDGGLDYRGDHRADYRDRRRDDDFRGGRQDRRFDD
RDRDRDRDRRDGGHGRGGRRDDRRANGAPSRNANGASGNDELDTIKKRYLGQKEEVKKPW
MRKATNKNAIFDWSAADDTSSQRVWVPTEGTHTRSAAASSTGSPAPGESKFTDALERRRA
GKGGNDDRHWSEKPLEEMKERDWRIFREDYSISSRGGAIPNPLRTWRESAIPERICDIVD
TIGYTEPSPIQRQAIPIGLQNRDLVGLAKTGSGKTAAFLIPMLTYISRLPALNDDNRHLG
PYALILAPTRELAQQIEAEAAKFCGPLGYTCVSIVGGRSVDEQQFNLRDGSHLVIATPGR
LKDMIDKSILVMSQCRYVVMDEADKMVDLGFEADLTFILDAMPAPKEEGDKSDRVMTLFS
ATMPPAVERLTRKYLRKPATVTIGTAGEAVDTVEQRVEFVSGEEKKKARLQEILRSHALP
PPILVFVNQKTTADVVVRYVQQAGRAATTLHSGKNQEQREASLKALRDGDVEVLVATDLA
GRGIDITDVSLVINWQMTDTIEKYVHRIGRTGRAGKEGLAITFLDNNDEEVMFDLKQEIQ
KSARSTMNPELARHEAARQKVTREMKRKRDEFDD
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcccactctccgtcgaagacattctcgcccagcaaaaggctgagcgtgaggcc
gcggcaaagccaaaattcatgaccaaggcgatgcgcgagaagctcgctgcggagaaagct
gcggccgattcgtcctccaccaaagagaaggagcggggagatcgggcccgccgagaaggg
ctggaacgcgcagcggccgaggagcggcggcgggcggatgtgaaccgccgcgatcgggaa
cgcgaaagggatactcgcgacggggggttggattatcgcggtgaccaccgtgccgattac
cgcgaccggcgcagggacgatgattttcgcggtggacgacaggaccgtcggttcgacgac
cgcgatcgtgatcgtgatcgtgatcgtcgcgacggcggacatggacgagggggacggcgc
gatgaccgccgcgccaacggggctccaagccggaatgccaatggcgccagcgggaacgac
gagctggatacaatcaagaagcggtatctgggccagaaggaagaggtcaagaaaccatgg
atgcgcaaggcgacgaacaagaatgccatctttgactggagcgccgccgacgatacatcc
tctcagcgggtatgggtgcctacagagggtacgcacacgcgctccgccgcggcgagtagc
acgggatcgccggcgcccggcgagagcaagtttacggatgcgttagagcggcggcgtgcc
ggaaagggcggtaacgatgatcggcactggagcgagaagccgctcgaggagatgaaggag
cgcgactggcgtatcttccgcgaggactactcgatctcgtcccgcggcggagccatcccc
aaccccctgcggacgtggcgcgaaagcgcgattccagagcgtatctgcgacattgtcgac
acgatcgggtatactgagccctccccgattcagcggcaggccatcccgattgggctgcag
aaccgcgacctcgtcggcctggccaagacaggttcgggcaagacggcggccttcctcatt
cccatgctcacgtatatttcgcggctgccggcgctgaatgacgataatcgtcatctgggg
ccgtacgctttgattctcgccccgacgcgtgaactcgcccagcagattgaggccgaggcg
gcaaagttctgcgggccgctcgggtacacttgcgtgtcgattgttggtggacggagtgtc
gacgagcagcagttcaacctccgtgacggttcgcatcttgttatcgcgactccgggtcgt
ctgaaggacatgatcgacaagagtatactagtcatgtcccagtgtcgctatgtggtcatg
gacgaggccgacaagatggtcgatctcggctttgaagccgacctcacctttatcctcgac
gccatgcccgctcccaaggaggaaggcgataagagcgaccgcgtaatgactctcttctcg
gcgaccatgccgcccgccgttgagcgcctcacgcgaaagtacctccgcaaaccggccact
gttaccatcggcacagcgggtgaggcggtcgacacggtcgagcagcgcgtcgagttcgtc
agtggcgaggagaagaagaaggcgcgcctgcaggagattctgcgcagccacgccctgccg
ccgcccattctcgtgttcgtcaaccagaagacgacggccgacgtcgtcgtaagatatgtc
cagcaggctgggcgggcggctaccactctccactctggcaagaaccaggagcagcgcgag
gcgagtctcaaagccctccgcgacggcgatgtcgaggtcctcgtcgctaccgacctcgcg
ggtcgtggtatcgacattaccgatgtctcgctcgtcatcaactggcagatgacggatacg
attgaaaagtacgtccatcgtatcggtcgtaccggtcgtgcaggcaaggagggtctcgcc
atcacgtttctcgataacaacgacgaggaggtcatgttcgacctcaaacaggagatccag
aagtcggcgcgctcgacaatgaaccccgagctcgcacggcacgaagcggcgcggcaaaag
gtcacgcgcgagatgaagcgcaagcgcgatgagttcgacgactag
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