Cutaneotrichosporon cavernicola: CcaHIS019_0206410
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Entry
CcaHIS019_0206410 CDS
T09540
Symbol
VTS1, CcaverHIS019_0206410
Name
(RefSeq) uncharacterized protein
KO
K27407
RNA-binding protein VTS1
Organism
ccac
Cutaneotrichosporon cavernicola
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0206410 (VTS1)
04131 Membrane trafficking [BR:
ccac04131
]
CcaHIS019_0206410 (VTS1)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
CcaHIS019_0206410 (VTS1)
Membrane trafficking [BR:
ccac04131
]
SNARE
SNARE associated proteins
Others
CcaHIS019_0206410 (VTS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
85493150
NCBI-ProteinID:
XP_060454545
UniProt:
A0AA48I445
LinkDB
All DBs
Position
2:join(1653755..1654189,1654227..1654290,1654332..1655680,1655716..1655829,1655870..1655947)
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AA seq
679 aa
AA seq
DB search
MASSTLRPHRSPSPSPGSGQAINPNNPAKLTRQSLGPPTTSGNSSAARGFGALGTSPGSS
SGFSSQPRHVSSSVAMGLGSLSNQRDSLSPRPATLTGRTVSGSSNQVRPSSEFLPTGAAR
DQARTPEAEQIDQWFKHLASWEATLEEMAAASTDQNFTEELGAIEQWFRVLSEAERTAAL
YSLLQHSTSVQIRFFLSVLHHMAQADPMTAMLSPGPAAGPAAAAAHSQMDSKLAGMGLKS
PSAGGGGAGFAGSPTTHNYLAPESALDSVMSKPKIRQNRISAPGTLTSSNESRWSSNLDQ
VIERGPSPGLESVRSRSPQPDMRPKSTDFAGGAGAHDDRYSSSSATPRLSAGPGSLGLGF
PGSDQSPNAASPLLNPSGNWSSIQNTPMNLMFNQDNKNEPINAALSFANLQLAAGAAAAA
NRVQLDDARKYRRPGGGTTAPSSRNVSGASAYGDDDGRTSPLPPSGNAFGWNSSGGNRSG
GDFGGLGLGDPNLANLNMNLANLNLAGMNPLSPNAMQVLALAQAQQVAQAAQGLQAAQLG
QYGGLGQNLNAPRPSNRVPSGRRSPMLGHKAASPGPAGPAAGGGGAGGGAGVAGPDDVDQ
KVLEDVSTWLRVLRLHKYTTNFEHTKWRDMVMMNEGDLERYGVAAQGARSKFLKVFYNVR
TKFDIPHPPGQEEYAPTKE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcaactctccgccctcaccgctccccctctccttctcccggctctggtcaa
gccatcaatcccaacaatcccgccaagctcacgcgtcagtcgctcggcccgcccaccacg
tctggcaactcgtcggcggcgcgcggtttcggcgctctaggcacctcgcctggtagcagc
tctgggttctcctcccagccccgccacgtctcgagctcggtcgccatgggcctcggcagc
ctctccaaccagcgcgattcgctctccccccgccccgcgacgttgacaggacgcaccgtc
agcggtagctcgaaccaggtgcggccctcttccgagttcctccctactggcgcggcgcgc
gatcaggctcggacgcccgaggccgagcagattgaccagtggttcaagcacctcgcctcg
tgggaggccactctggaggagatggccgcggcgagcacggatcagaactttaccgaggag
ctcggagccattgagcagtggttccgcgttctgtccgaagctgagcgtacggccgcgctg
tactcgctccttcagcactcgacctccgtacagatccggttcttcctcagcgttctccac
cacatggcccaggccgaccccatgaccgccatgctgtcaccaggcccagcggctggcccg
gctgccgccgctgctcactcccagatggacagcaagcttgccggtatgggtctcaagtcg
ccgtctgctggcggcggtggtgcaggctttgctggctcgcccaccacccacaactacctc
gcgcccgagtcggcgctcgattcggtcatgtccaagcccaagatacgccagaaccgcatc
tctgcaccaggaaccctcacctcgtcgaacgagtcgcgctggtctagcaacttggatcag
gttatcgagcgtggaccctcgcctgggctcgagagcgtgcgtagccgcagcccccagcca
gacatgcggcccaagtcgactgactttgcgggcggcgcaggcgcgcacgacgaccgctac
agctccagctcggcgaccccgcgtctcagtgccggccctggctcgcttggccttggcttc
cccggctcggaccagtcgcccaacgcggccagcccgctgctcaacccctctggcaactgg
tcgtcgattcagaacacgcccatgaacctcatgttcaaccaggacaacaagaacgagcct
atcaacgcggcgctgagctttgcgaacttgcagctggccgctggcgccgctgcggcggcc
aaccgcgtccagctcgacgatgcacgcaagtaccgccgacccgggggtggcactactgct
ccgtcgagccgtaacgtatccggcgcctccgcgtacggtgacgacgacggccgcacctcg
ccactcccgccctccggcaacgcgttcggctggaacagcagcggcggcaaccgcagtggc
ggcgactttggcggcctgggcctcggcgatcccaaccttgccaacctgaacatgaacctc
gcgaacctcaacctcgccggaatgaacccgctcagccccaacgcgatgcaggtactggcg
ctggctcaggcgcagcaggtcgcgcaggcggcgcagggactgcaggcagcccagctcggc
cagtacggcggactgggccagaaccttaacgccccccggcccagcaaccgcgtcccctcg
ggtcgccgcagccctatgcttggccacaaggccgcaagccctgggccagcgggtcctgca
gccggcggcggtggtgccgggggtggtgcgggtgtcgccggccctgacgacgtcgaccag
aaggtgcttgaggacgtgtcgacttggctacgtgtgctccgcctccataaatacaccacc
aactttgagcacacgaagtggcgtgacatggtcatgatgaacgaaggcgaccttgagcgg
tacggcgttgctgcgcagggtgctcgcagcaagttcctcaaggtgttctacaacgtgcgc
acaaagtttgacattccacacccgccagggcaagaggagtatgccccgaccaaggagtag
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