Cutaneotrichosporon cavernicola: CcaHIS019_0208260
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Entry
CcaHIS019_0208260 CDS
T09540
Symbol
CcaverHIS019_0208260
Name
(RefSeq) uncharacterized protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CcaHIS019_0208260 (CcaverHIS019_0208260)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0208260 (CcaverHIS019_0208260)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CcaHIS019_0208260 (CcaverHIS019_0208260)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
HBS1_N
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Ras
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
85493335
NCBI-ProteinID:
XP_060454730
UniProt:
A0AA48KYJ3
LinkDB
All DBs
Position
2:complement(join(2119607..2120886,2120921..2121301,2121493..2122572,2122639..2122791,2122841..2122951,2122986..2123025))
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AA seq
1014 aa
AA seq
DB search
MSRHRFVRNMDLGAELADDHPDDYDDEGGYSGEGGYTSDEPDDGMDPEERAQMESTFPLV
KEKLKDIKPPITEAAIKDSLWHYWFDVDKAASWLRKDWEKKGDPPAFLIPSPDQQPRPRP
SARRAQEIVAPKLEPVTALLTPLQRLKLQREKRNAASGTSSPSTASALPSVKPSTTVSPA
PTPPLDEARPKSKLALLAQKRRENASKESTTPSSTSPAASSTDPTPPPADAPAKPISKLA
QKMAAARAARAVAPKATAEASVGETSAIDFPSTAVAAEPADEEWEFLPKAKIAQARATPS
VFFSLLTTRKQAAVIPDPPSLANMHIAVRGDRAAAEKRVREAFGPGVESPDDIVLRARAG
RAGAGDGEATQTKSAVRATKVEQPAPEPVSEAAAAMAKPKEEDLPGPEPAAKGTKPSTKH
SKPPKASEKPPVARGSRSQPKAAPKPKAEAKPKADPTPRVPIAKAAVPPAARSKSLPAKQ
RVMSSGPGTPSRSTSNAPSSRAPSSKASSKPGSNVSTPRRGTGTPLSLAASDLAELGLED
SVDEEFLRREAEKYREVPVPTLKQEELVAKVKEDEEKTGKKNISLVVVGHVDAGKSTLMG
RLLYDLGEMSEKEKTANERGSLRVGKSSFAFAWGLDALGDERDRGVTIDIATEHFETPHR
NVTLLDAPGHRDFIPAMISGAAQADVALLVIDASPNAFEAGFERGGQTREHAWLVRSLGV
KEIIVGVNKMDVVDWDQYRYEDIVAGLKPFLAAAGFAGARTTFLPLAAMKGTNILNDTLP
EDADWYKGPSLMAALDRVAVPERPYSVPLRIPISNVFKGQTAIASGVACQGRLASGVVQV
GDQVRVVPGDVVASIRTIEVDDDSAPFAVAGQNVTLYLAGVDANQLSIGAVLCPVSYPIR
MVSRFQSQILVFDVTTPIIMGTAVELFHHSVNVPANITRLIATTDRTGNVIKNNPRVLQK
GTTAVVELTLRAPTGSTRPAIIPLETAKENKEMGRVLLRRGGETIAAGVVTELL
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcatcgctttgtgcgcaacatggacctcggcgccgagctcgccgatgaccac
ccggatgactacgacgatgagggtggctactctggcgaaggtggctacacctccgatgag
cccgacgacggcatggaccccgaggagcgtgcgcagatggagtctaccttcccgctcgtc
aaggagaagctcaaggacatcaagcccccaataaccgaggctgcaatcaaggactcgctc
tggcactactggttcgacgtggacaaggcggcgtcctggctccggaaagactgggaaaag
aaaggcgacccgcctgcattcctcatccccagccccgaccagcaaccacggcctcgacca
agtgcccgacgagcacaagaaatcgtggctccaaagctcgaacctgtgacggcgctcctc
acgccactgcagagactcaagctgcagcgcgagaagcgcaacgcggcctctgggacctca
agcccgtcgactgcatctgcgctaccaagcgtcaagcccagcaccaccgtttcaccggcg
cccaccccacctctagacgaggcccgaccgaaatcgaaactggcgctcctagcccagaag
cggcgcgagaatgcttcaaaggagtcgacaacgccatcgagcacttccccggcggcttca
tcgactgacccaacccctccacctgccgatgcgcccgcgaagcccatatccaaactggct
cagaagatggccgcagcgcgtgccgcccgggcagttgcccctaaggctactgcggaggct
tcagtcggcgagacgtcagcgatcgacttcccatcaactgccgtggcggccgagcctgcg
gatgaggagtgggaattcctgcccaaagccaagatcgcacaggcaagagcgacgccgtcc
gtcttcttcagcctcttaactacgcgcaagcaggcggctgtgattccggaccctccctcg
ctagccaatatgcacatcgccgtgcgtggcgatcgagctgcggcggagaagcgcgtgcgc
gaggccttcggcccgggtgttgaaagtcccgacgatatcgttctgcgtgcgcgtgccggc
cgagctggcgctggagacggcgaggcgacgcagaccaagtctgccgtgcgcgccaccaag
gtcgagcagcctgctcccgagcctgtctctgaggctgcggcggccatggccaagccaaag
gaggaggacttgccgggccccgagcctgcagcgaagggcaccaagccgtccacaaagcat
tcgaaacctcccaaggcgtccgagaagccaccagtggcgaggggcagcaggagtcagcca
aaggcggcacccaagcccaaggcagaggcaaagcccaaggcagacccaacgcctagggtt
ccgattgccaaggctgccgtgcctccagccgcccgctccaagtcgcttcctgccaagcag
cgtgttatgtcctcgggccctgggacgccgagccgttccacatcgaatgctccttccagc
cgcgcacccagctccaaggcgagctccaagcccgggtctaacgtcagcacgccgcgcagg
ggcacgggtacgccgctctcgctcgctgcatcggacttggcagagcttggactggaggat
agtgttgacgaggagttcttacgccgtgaggcagagaagtatcgcgaggtgccggtgcct
acactcaagcaggaagaattggtcgccaaggtcaaggaggatgaggagaagactggcaaa
aagaacatttcgctcgtcgttgttggccacgtcgatgccggcaagtcgaccctcatggga
cggctgctgtacgaccttggagagatgagcgagaaggagaagacggcgaacgagcgcggt
tctctgcgcgtgggcaagagcagctttgcgttcgcgtggggtctcgacgcgcttggcgac
gagcgcgaccgcggcgtgaccatcgacattgcgacggagcactttgaaaccccgcaccgt
aacgtgacgctgctcgacgccccgggacacagggactttatccccgccatgatcagtggt
gcggcgcaggccgacgttgcgttgcttgtgatcgacgcgagcccgaacgcgttcgaggct
gggtttgagcgtggtggccagacgcgcgaacatgcgtggctggtccgctcgctcggtgtc
aaggaaatcattgtgggcgtgaacaagatggacgttgtcgactgggaccagtaccggtac
gaggacattgtggctggcctcaagccgttcctcgcggccgcaggctttgcgggcgcgcgc
actaccttcctccctctggctgcgatgaagggtaccaacatcctcaacgacacgctcccc
gaggacgcggactggtacaagggtccatcgctgatggcggcgctggatcgcgtcgccgtt
cccgagcggccgtattctgtgcccctccgcatccccatctcgaacgtgttcaagggtcag
acggcgatcgcgtccggcgtcgcatgtcaaggccgcctcgcctcgggtgtcgtgcaagtt
ggcgaccaagtgcgggtagttcccggagacgtggtagcgagtatccgcacaatcgaggta
gacgacgacagtgctcctttcgcggtcgcaggccaaaacgtaactctctatctggccggc
gtggacgcgaaccagttaagcatcggcgcggtcctctgtcccgtctcgtacccgattcgt
atggtgagccggttccagtcccagatcctcgtattcgacgtaacgacccccattatcatg
ggcacggccgtcgagctattccaccattccgtcaacgtgccggccaacatcacccgtctc
attgcgaccacggataggactggcaacgtgatcaagaacaatccacgtgtcctgcagaag
ggcacgacggctgttgtggaactcactctgcgtgcgccgacggggagtactcggccggct
attattccactcgagacggccaaggagaataaggagatggggagggtgttgctccgtcgc
gggggggagactattgccgctggcgtggtgaccgagctgctctga
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