Cutaneotrichosporon cavernicola: CcaHIS019_0209250
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Entry
CcaHIS019_0209250 CDS
T09540
Symbol
CcaverHIS019_0209250
Name
(RefSeq) uncharacterized protein
KO
K13192
RNA-binding protein 26
Organism
ccac
Cutaneotrichosporon cavernicola
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccac01009
]
CcaHIS019_0209250 (CcaverHIS019_0209250)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0209250 (CcaverHIS019_0209250)
03041 Spliceosome [BR:
ccac03041
]
CcaHIS019_0209250 (CcaverHIS019_0209250)
Protein phosphatases and associated proteins [BR:
ccac01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CcaHIS019_0209250 (CcaverHIS019_0209250)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
CcaHIS019_0209250 (CcaverHIS019_0209250)
Spliceosome [BR:
ccac03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
CcaHIS019_0209250 (CcaverHIS019_0209250)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
PWI
RRM_1
RRM_3
Torus
Laminin_B
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
85493434
NCBI-ProteinID:
XP_060454829
UniProt:
A0AA48IFY0
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All DBs
Position
2:complement(join(2367639..2368058,2368143..2369158,2369205..2369551,2369598..2369665))
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AA seq
616 aa
AA seq
DB search
MSIQEATASPDFKQWLVIALEPICDAEPDVLADYFIAWLVTDSDPVRASWTDDQWEEYAA
NDLQDFLADQALPFVKAAFQTIRSKSYLPAAPLLAPAPGQPPQAPHSLPANPMVSQSPGD
VDMGEGERRPRQRCRDYHERGFCMRGADCQFEHSDDMIIPTAEMMFAQMGNFMGPQGRGG
FRGRGRGRGRGGPPMPFDPHMGGMMPPMFFPGPGGPGGPGGPGGPGGPGGPGGRGGRPAP
PPEFALGASRPPRDRNGNTLLITEIPRENCNMASITEYFSQFGDVTNVAVEGHSRRALVS
FTSNGEAYQAWKSDAAVFDNRHVKVLWHKPLPGHGGAGQKALEASKTLLENMKRLEAGED
LQGNHQVKLEGPESRLRKTLAELETRERNQKRETLIAEQKVLFARAGTASQEDKMEILKR
VKEIKLELAVIENPPKEEMSAKDKLDAQLAKHGMETSGGDEEELLRLNAQLTALRDKAST
MGIPQRYSPYNRGAPRGRGRGRGRGRGGYGGFGAMRLDNRSKAVHVSGDGLQGSADAVLE
WYRSTGGNVEQVSDGVLVTYPSREAAEKALARGTGEIAGLSGEISAKWHGSGGDEIQVHA
GEVEMGDEERERGERE
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatccaagaggcaacagcctcaccagacttcaaacaatggctcgtaatagctctc
gagccaatttgcgacgcagagcccgacgtcctcgccgactacttcatagcatggctcgtc
accgactcggacccggtacgcgcgtcatggaccgacgaccagtgggaggaatacgcggcc
aacgacctgcaggactttcttgcggaccaggccctgccgttcgtcaaggccgccttccag
accatccgctccaagagctacctcccggccgcgcctctactcgcaccggcacctgggcag
ccaccacaggccccgcactcccttcctgctaaccccatggtctcccagagcccgggtgac
gtcgatatgggcgagggagagcgaagaccgaggcagcgctgcagggattaccatgaacgc
ggcttttgcatgcgcggcgccgactgccagttcgagcacagcgacgacatgattatccct
accgccgagatgatgtttgcgcaaatgggcaactttatgggcccacagggccgcggcggc
ttccgcgggcgaggaagaggacgcgggcgcggtgggccaccgatgcccttcgacccgcac
atgggtggcatgatgccaccgatgttcttccccggtcccggagggccaggaggaccagga
ggaccaggcggtccaggtgggccaggcggtccaggtgggcgtggcgggaggccagccccg
ccgcccgagtttgctctcggcgcatcgcgtcccccgcgcgaccgcaacgggaacacgctc
ctcatcaccgagatcccgcgtgagaactgcaacatggcctcgatcaccgagtacttctct
cagttcggcgacgttaccaacgttgcggttgagggacactcccgccgggcgctcgtgagc
ttcactagcaacggcgaggcgtaccaggcgtggaagagcgatgctgccgtcttcgacaac
cgccacgtcaaggtgttgtggcacaagcccctgcccggtcacggcggggcgggacagaag
gcgctcgaggccagcaagacgctgctcgagaacatgaagcgtctcgaggccggcgaggac
ctccaaggcaaccaccaggtcaagctcgagggcccggagagccggctgcgcaagacgctc
gccgagctcgagacgcgcgagcgcaaccagaagcgcgagacactcatcgccgagcagaag
gtgttgtttgcgcgcgcaggcaccgcgagccaggaggacaagatggagattctgaagcgc
gtcaaggagatcaagctcgaactggccgtgattgaaaacccgccgaaggaggaaatgagc
gcgaaggacaagctcgacgcccagcttgctaagcacggcatggagacgtcaggtggggac
gaggaggagctcctccgcttgaatgcgcagctcacagcgttacgggacaaggcatccacc
atgggcattccccagcgctactcgccatacaaccgaggcgcgccacgcggacgcgggcgt
ggtcgtggcaggggtcgcggcgggtacggcggctttggcgcgatgcgcctcgacaaccgc
tccaaggccgtgcatgtttctggcgacgggctgcagggctccgccgacgccgtgctcgag
tggtaccgatcgacaggcggcaacgtcgagcaagtgtctgacggcgttttggtgacgtac
cccagccgcgaggctgcggagaaggcgctcgcacgcggcacgggcgagatcgctggcttg
agcggagagattagcgccaagtggcacggtagtggcggcgacgagatccaggtgcacgct
ggtgaagttgagatgggcgatgaagagcgcgagcgcggcgagcgcgagtag
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