KEGG   Cutaneotrichosporon cavernicola: CcaHIS019_0209640
Entry
CcaHIS019_0209640 CDS       T09540                                 
Symbol
CDC48, CcaverHIS019_0209640
Name
(RefSeq) uncharacterized protein
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
ccac  Cutaneotrichosporon cavernicola
Pathway
ccac04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ccac00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    CcaHIS019_0209640 (CDC48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccac03019]
    CcaHIS019_0209640 (CDC48)
   03009 Ribosome biogenesis [BR:ccac03009]
    CcaHIS019_0209640 (CDC48)
   04131 Membrane trafficking [BR:ccac04131]
    CcaHIS019_0209640 (CDC48)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccac04147]
    CcaHIS019_0209640 (CDC48)
Messenger RNA biogenesis [BR:ccac03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     CcaHIS019_0209640 (CDC48)
Ribosome biogenesis [BR:ccac03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    CcaHIS019_0209640 (CDC48)
Membrane trafficking [BR:ccac04131]
 SNARE
  SNARE associated proteins
   Others
    CcaHIS019_0209640 (CDC48)
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    CcaHIS019_0209640 (CDC48)
Exosome [BR:ccac04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CcaHIS019_0209640 (CDC48)
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_33 AAA_2 AAA_5 AAA_16 TIP49 CDC48_2 AAA_22 Mg_chelatase AAA_14 AAA_28 RNA_helicase nSTAND3 Parvo_NS1 NPHP3_N AAA_7 AAA_17 AAA_25 Vps4_C AAA_18 DUF815 nSTAND_NTPase5 ABC_tran AAA_24 ResIII IstB_IS21 TsaE Sigma54_activat NB-ARC NACHT Molydop_binding
Other DBs
NCBI-GeneID: 85493473
NCBI-ProteinID: XP_060454868
UniProt: A0AA48L1V6
LinkDB
Position
2:complement(join(2464346..2464358,2464406..2464591,2464639..2464943,2464989..2465041,2465079..2465133,2465179..2465404,2465448..2466391,2466448..2466570,2466615..2466691,2466739..2466845,2466892..2466970,2467010..2467093,2467136..2467152,2467198..2467290,2467341..2467390,2467555..2467572))
AA seq 809 aa
MADPSQPVADDSTATAILRQKKSPNRLMVDETTSDDNSVAVLHPNTMETLGLFRGDTVIV
RGKRRKDTVLICLSQDDIEEGKICMNKVARGNCAAKLGDLVHVSAANDIKYGKRIHVLPF
SDSVEGLSGNLFDVFLKPYFLEAYRPVRKGDVFQVRGGMRTVDFKVIEVDPSPYCIVASD
TVIHTEGEPLDREAEEADLNAVGYDDLGGCRKQLAQVRELVELPLRHPQLFKAIGIKPPR
GILMFGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPS
IIFIDELDSIAPKREKTNGEVERRVVSQLLTLMDGLKARSNVVVMAATNRPNSIDPALRR
FGRFDREVDIGIPDPTGRLEILRIHTKNMKLSDDVDLEQIAADTHGYVGADMAALCSEAA
MQQIREKMDMIDLDEDTIDAEVLDSLGVTMENFRYALGVNNPSALRETVVEIPTTTWNDI
GGLDKVKRELQETVSYPVEHPEKFLKYGLSPSKGVLFYGPPGTGKTMLAKAIANECQANF
ISIKGPELLTMWFGESEANVRDVFDKARAAAPCVMFFDELDSIAKARGGSSGDAGGAGDR
VLNQILTEMDGMNAKKNVFIIGATNRPDQIDSALLRPGRLDQLIYIPLPDEASRLSILQA
TLRKSPIDPRVDLNYLAKQTAGFSGADLTEICQRAAKLAIRQSIEADIRKEHDRKEKAEA
AGGDVDVDIMDEENDVDEVPSITVDHFEEAMKFARRSVSDADIRRYEMFSSTLQQSRGFG
NNFKFPESGETEQGGAAFQNEADDDDLYA
NT seq 2430 nt   +upstreamnt  +downstreamnt
atggcggacccctcccagcccgttgctgacgactcgacggctactgccatcctccgtcag
aagaagtcgcccaaccgtctgatggttgacgagactacttctgatgacaacagcgttgct
gtccttcacccaaacactatggagacccttggtctgttccgtggcgacactgtcatcgtt
cgcggtaagcgcaggaaggacaccgtcctcatctgcctgagccaggacgatatcgaagag
ggcaagatctgcatgaacaaggttgctcgcggtaactgcgccgccaagcttggcgacctc
gtccacgtctcggctgccaacgatatcaagtacggcaagcgcatccacgtccttcccttc
tcagactcggttgagggtctttctggcaacctcttcgacgtgttcctcaagccgtacttc
ctcgaggcttaccgcccggtccgcaaaggtgacgttttccaggtccgtggtggcatgcgc
accgtggacttcaaggtcatcgaggtcgacccctctccatactgcattgttgcgtcggac
accgtcatccacactgagggcgaaccgctcgaccgcgaggctgaggaggccgacctgaac
gccgttgggtacgatgacctcggtggctgtcgcaagcagcttgcgcaggtccgcgagctc
gttgagctccctctgcgccaccctcagctcttcaaggctattggcatcaagcctcctcgt
ggtattctgatgtttggcccccccggtactggcaagaccctcatggctcgcgctgtcgcc
aacgaaactggcgcgttcttcttcctgatcaacggtcccgagatcatgtccaagatggcg
ggcgagtccgagtccaacctccgcaaggcattcgaggaggccgagaagaacagcccctcg
attattttcatcgacgagctcgactccatcgcgcccaagcgtgagaagaccaacggcgag
gtcgagcgtcgtgtcgtctcgcagctcctcacgctcatggacggactcaaggctcgttcc
aacgttgttgtgatggctgctaccaaccgtcctaactcgatcgaccctgctcttcgtcgt
ttcggtcgctttgaccgtgaggtcgacattggtatccccgaccccactggccgtctcgag
attctccgcatccacaccaagaacatgaagctctcagacgatgtcgaccttgagcagatc
gccgccgacacccacggctacgttggtgccgacatggctgcgctctgctctgaggctgcc
atgcagcagatccgcgagaagatggacatgatcgacctcgacgaggacacgattgatgcc
gaggtcctcgactcgcttggtgtcaccatggagaacttccgctacgcgctcggcgtcaac
aacccgtcggcactccgtgagactgtcgttgagattcctaccaccacctggaacgacatt
ggtggcctcgacaaggtcaagcgtgagctccaggagacggtctcctaccctgtcgagcac
ccggagaagttcctcaagtatggtctctcgccctccaagggtgttctattctacggcccg
cctggtacgggtaagaccatgcttgccaaggccattgccaacgagtgccaggccaacttc
atctcgatcaagggtcccgaactcctcacaatgtggttcggcgagtcggaggccaatgtc
cgcgacgtcttcgacaaggctcgtgccgctgcaccatgtgtgatgttctttgacgagctg
gactccattgctaaggctcgcggtgggtcctcaggcgacgctggcggtgctggtgaccgt
gtcctcaaccagattcttaccgagatggacggcatgaacgctaagaagaacgtcttcatc
atcggcgccaccaaccgccctgaccagattgactctgcgcttctccgtccgggccgcctc
gaccagcttatctacatcccgcttccggacgaggcatctcgtctgtctattctccaggcg
actctgcgcaagtcccctatcgacccccgtgttgatctcaactacctggccaagcagaca
gcgggcttctcaggtgcggacctcaccgagatctgccagcgtgcagccaagctggctatt
cgccagtccatcgaggccgacattcgcaaagagcacgaccgcaaggagaaggcggaggct
gccggtggcgacgtcgacgtcgacatcatggacgaggagaacgatgtggatgaggttccc
tccatcaccgttgatcacttcgaggaggccatgaagttcgctcgccgctccgtctcggac
gccgacatccgtcgctacgagatgttcagcagcacgcttcagcagtcacgtggcttcggc
aacaacttcaagttccccgagagcggggagactgagcagggcggagctgcgttccagaac
gaggcagacgacgacgatctctatgcgtaa

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