Cutaneotrichosporon cavernicola: CcaHIS019_0211040
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Entry
CcaHIS019_0211040 CDS
T09540
Symbol
rsd1, CcaverHIS019_0211040
Name
(RefSeq) uncharacterized protein
KO
K13091
RNA-binding protein 23/39
Organism
ccac
Cutaneotrichosporon cavernicola
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccac03041
]
CcaHIS019_0211040 (rsd1)
Spliceosome [BR:
ccac03041
]
Common components
Common spliceosomal components
General mRNP proteins
CcaHIS019_0211040 (rsd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_3
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
85493613
NCBI-ProteinID:
XP_060455008
UniProt:
A0AA48I5L4
LinkDB
All DBs
Position
2:join(2869375..2869445,2869610..2870096,2870130..2870344,2870379..2871333)
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AA seq
575 aa
AA seq
DB search
MADTPPHPPRPLPGSRDRTPELTTKREKRHREDDDDDRDRRSRRRDDDRDRSRDHRRRYD
DDDDDRERRRRRERERERDNNRRRDRSRDRSRDRSRDRSRSRDRDRDRDRRRDRSRSREP
RNRSRSRDRSRDRSRDHDRPRRPRDDSRERERARLKAMTREEKERERDRRDREMREERRE
MARREGRDYNSPRRRPSFSREASQLLDEVDAEARSVFVSQIAARLTSQDLGHFFDDMLGR
GSVRDARIITDKGRRSKGMGYVTLRSPDLVNKALNLSGKVVVGIPILVGLTPADSYEGMS
LKAVIASIRGQRETQKELHASRPRGPRYPPITPGAIPSSIDPNAHAGAAIPYHRLYITKL
SDTLSNDDLRQVFDPFGEIEFVDLHVDHSGASKKTAYVQFAELPAAQMAIDAMNDFELAG
EKIQVQPVEERNAQFENMEGDQRRGGRLDAAGRMELMKKLARTDDASRPRVAAPPKPERQ
RPTHFLMVSNMFNPDEETERNWDTDLAEDIQDEVNNKYGRVARIKVDKMSQGDVYIEFAD
LDGSENARRGLQDRWFGGRKLEAQFISEALFKAHL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcagacactcctccgcaccctccgcgtccgctgccgggcagcagagaccgtactcct
gaactcactactaaacgtgagaagcgtcatcgcgaagatgacgatgatgatcgtgacaga
aggtccagacgccgcgacgacgaccgtgaccgcagccgcgaccaccgccgccggtacgat
gacgatgacgacgaccgcgaacgccgccgccgccgtgaacgcgagcgtgagagagacaat
aaccgccgccgtgaccgcagccgtgaccgtagccgtgaccgtagccgtgaccgcagccgc
tccagagaccgtgaccgtgaccgcgaccgccgccgcgaccgatcgcgctcgcgcgagccc
cgaaaccgctcccgctctcgtgaccgctctcgtgaccgctctcgtgaccacgaccggccc
cgccgtcctcgtgatgactcgcgcgagcgtgagcgggctcgcctcaaggctatgacgcgc
gaagagaaggagcgcgagcgcgatcgccgtgaccgcgagatgcgtgaggagcggcgcgag
atggcccggcgcgaaggccgcgactacaactctccccgtcgccggccgtcgttctcgcgc
gaggcgagccagctgctcgatgaggttgacgcagaggcccgttcagtattcgtttcgcag
attgctgcgcgtcttaccagccaggacctaggtcatttcttcgacgacatgctcggccgc
ggctcggtgcgcgacgcgcgcatcatcactgataaaggccgccgctccaagggaatgggt
tacgtgacgctccgcagccctgacctcgtcaacaaggcgctcaacctatcgggcaaggtg
gtggtcggtatcccgatccttgttgggctcacgccggccgactcgtacgagggtatgtcg
ctcaaggcagtcattgcgagcatccgtggacaacgtgagacccagaaagagctgcacgcc
agccgcccacgcgggccccgctacccacctattactccaggtgctattccctcgagcatc
gacccgaacgcgcacgcgggtgcggcgatcccgtaccaccgtctgtatatcaccaagctc
tccgacacgctctccaacgatgacctcaggcaggtgtttgacccattcggcgaaatcgag
tttgtcgacctgcacgtggaccattccggcgcatccaagaaaaccgcgtacgtgcagttt
gctgagctccccgctgcccagatggccatcgacgcgatgaacgactttgagctcgcgggt
gagaagatccaggtccagcctgtcgaggagcgtaacgcccagttcgagaacatggaaggc
gaccagcgccgcggtggccgccttgacgccgccggccgtatggagctgatgaaaaagctc
gctcgcaccgacgacgcgagccgcccgcgtgtggcggcccctcccaagcccgagaggcag
cgcccaacgcacttcctcatggtgagcaacatgttcaacccagacgaggagacggagcgc
aactgggacacagacctggccgaggacatccaggacgaggtgaacaacaagtatggccgc
gtcgcgcgtatcaaggtcgacaagatgagccagggtgatgtttacatcgagtttgccgac
ctcgacgggtctgagaacgcgcgccgcggtctccaggaccgctggttcggcggccgcaaa
ctcgaggcgcagtttatttccgaagcgctgttcaaggcgcatctgtga
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