Cutaneotrichosporon cavernicola: CcaHIS019_0300390
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Entry
CcaHIS019_0300390 CDS
T09540
Symbol
CcaverHIS019_0300390
Name
(RefSeq) uncharacterized protein
KO
K18722
nucleoporin NUP2
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CcaHIS019_0300390 (CcaverHIS019_0300390)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0300390 (CcaverHIS019_0300390)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CcaHIS019_0300390 (CcaverHIS019_0300390)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
NUP50
Motif
Other DBs
NCBI-GeneID:
85493840
NCBI-ProteinID:
XP_060455235
UniProt:
A0AA48I5F3
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Position
3:complement(join(88196..90101,90141..90184,90239..90304))
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AA seq
671 aa
AA seq
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MAKRGADGQKTRDDTSDNEEEDPGVRTEALKPIEGRQIRSIPKRKGVAPSPFALGGSGGT
NGPSSSSAPAPAAAPPLPAASGGFGGFSFGKPTGPTPITTAPSTTTPSSFSFGSTDKPKE
KEDDAMDGSSKSAFGGFSFGKAAAPAEKAADRAAAAKPAFNGFNFGKAAAPASVAAPTPS
FGTAVSASAKEPAPPAQRVSSGIVPSQSAPPDDGEVAYYTALRGLNAAFLSFVSKSITSN
EFINLSVVLPDLVRQYEGYLAESSAKAGWKPAPAAAPCAPAAVAAKIAEKVENGKAVEKE
KEKAPAFSFAAPKKSSDAVNAAVAAVLAEKDEPEKKKEEPKKDKGFSFGSAKPAGLFAFA
PSAPLVPTTPDSKTFNPSEKLGKFGADGTTPQLPFGMASTPSKGPSTGFSFGSAEKKDSA
DQASSSPAFSFGSGPAVAKPADKPAFSFGSASSAKPADKSFSFGSSASGFTFGGSQDKDK
AEAVKPADKPGFSFGSSSSTPKPFTFGSSAPSFSFGSTSSTPPATTTPTSTTPAPSTTPA
TETPAGEETKNLADAEGAGEENETTVYEQRGKLYDLQGGKNTVVGLGQLKLKRAEDGKRR
LLMRADGSGTVVLNMALHAAFKATAEGKHVRFIGFDLAGKMKPFALLVKTPDFAKSLVEA
LTKEVAALKES
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgtggcgccgacgggcagaagactcgggacgacacctctgacaatgaggag
gaggacccgggcgtgcgcaccgaggccctcaagcctatcgagggccggcagatccgcagt
attcccaagcggaaaggggttgcgccgtcgcccttcgcgctcggcgggagtggtggaacc
aacggcccgagctcgagctcagcgcctgctcccgcggcagcgcctcctctcccagcagcg
tctggagggtttggaggcttcagcttcggaaagcctactggccccacaccaatcacgact
gctccatccacaactaccccgtcgagtttctcgtttggttccacagacaagcccaaagag
aaggaggacgacgcgatggacggcagctccaagtccgcgtttggcgggttcagcttcggc
aaggctgccgcgccagctgagaaggcggcggacagagcggctgctgccaagcccgcgttt
aatgggttcaactttggcaaggcggcggctcccgcatcggtcgcggcacccactccctca
ttcggcaccgcggtttcggcaagtgccaaggagcccgcgccgcccgcgcagcgggtatcg
agcggcatcgtcccgtcacaatcagcgccgcctgatgatggcgaggttgcgtactacacc
gcgctgcgtggactgaatgcggcgttcttgagcttcgtttccaagagcatcaccagcaac
gagtttatcaacctcagcgtcgtgctgcctgacctcgtgcggcaatacgaagggtacctc
gccgagtcgagtgccaaggcggggtggaagcccgcaccagcggccgcgccgtgcgctcca
gcggcagtggctgcaaagatcgccgagaaggtggagaacgggaaggctgtcgagaaggag
aaggagaaggcacccgcattctcctttgctgccccgaagaagagctcggacgcagtgaac
gctgcagtcgccgccgtcctagccgagaaggatgagccagagaagaagaaggaggagccg
aagaaggacaaggggttctcgtttggttccgccaagccggctggcctctttgcgttcgcg
ccgtcggctcctcttgttccgaccacgcctgacagcaagacgttcaacccgtcggagaag
ctcggcaagtttggcgccgacggcaccacgccacagctcccgttcggcatggcttcgacg
ccgagcaagggtccgagcaccgggtttagctttggcagtgccgagaagaaggactcggcg
gaccaggcgtcgtcgagcccggccttctcgtttggctcgggacctgcggtggccaagccg
gcagacaagcccgcgttctcgtttggctctgcttccagcgccaaaccggctgacaagtcg
ttctcattcgggtcctcggcctctgggttcacttttggcggctcgcaggacaaggacaaa
gcggaagctgtcaagccagctgacaagccaggcttttccttcggatcctcgtcatcgaca
cccaagccgtttacgtttggctcgagcgcgcccagcttctcctttggcagcacgtcctca
actcctccagcaaccaccaccccaacatccaccaccccggctccgtctacaacccccgcc
accgagactcccgcaggagaggagacgaagaatctcgccgatgccgagggcgcgggcgaa
gagaatgagacgaccgtgtatgagcagcgcggaaaactgtacgacctccaaggagggaag
aacaccgttgtcggtttagggcagctcaagctcaagcgtgccgaggacggcaagcgtcgt
ctcctgatgcgcgcggatgggagcgggactgtcgtgctcaacatggcactgcacgctgcc
ttcaaggccactgcggaggggaagcatgttcggttcattggctttgacttggctggcaag
atgaagcctttcgcgctcctggtcaagacgcccgactttgccaagtcgctcgttgaggcc
ctgacgaaggaggttgcagcgctcaaggagtcatag
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