Cutaneotrichosporon cavernicola: CcaHIS019_0301640
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Entry
CcaHIS019_0301640 CDS
T09540
Symbol
ECM16, CcaverHIS019_0301640
Name
(RefSeq) uncharacterized protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
ccac
Cutaneotrichosporon cavernicola
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccac03009
]
CcaHIS019_0301640 (ECM16)
Enzymes [BR:
ccac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CcaHIS019_0301640 (ECM16)
Ribosome biogenesis [BR:
ccac03009
]
Eukaryotic type
90S particles
Helicases
CcaHIS019_0301640 (ECM16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
FtsK_SpoIIIE
AAA_23
AAA_16
Motif
Other DBs
NCBI-GeneID:
85493965
NCBI-ProteinID:
XP_060455360
UniProt:
A0AA48KZ53
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All DBs
Position
3:join(425299..425488,425588..425889,425924..427799,427834..429317)
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AA seq
1283 aa
AA seq
DB search
MPPPVRERYNSKARGSVAGGSSHKNRKRKAKREGEPEEAKLAQPHHEAGMSSKKRKRLDS
YIATSMAMVSSAGLGQNPFAPPTALQRAEIAEDKAVRRGIERLKRRHGEADSDSEDEGRR
RVEVVATVAGQEEIETTVLETKGERKAREKAEARGSGKLKMPKKAGWNPELKTKGDSSSE
FDSSDSGEDIESEAEAEKVEEPKELPKPAHSALKPVGGAVKPAAGIAPKASTGSALKPFN
GSALKPSTGSALKPTAGSALKPSPGGALKANVGGALKTAADGSAYQPRVVTRGPKKFAPA
RRRQESSEISDGGEDSDGDDSDDEDSDDESDDDEDSDDEEDSDDEEDSDGASEEGSEGES
ESEGDDSDEQMEEDGDTDVAPKQKVNFKEWALKQMGSGDAEKSLAPDLLSAPVQPKKTPA
PKTGEFVGPMGAAYHIPATSLLTGDEGLVARPALKRRPSVVEARMELPILAEEQTIVEAV
RMHPVVIICGETGSGKTTQVPQMLYEAGFGFAGSANPGMVAVTQPRRVAAVSLAERVRDE
LGFPPSSGVVAHQIRYSSTTAPDTAIKFMTDGVLLRELANDFLLSRYSVVVVDEAHERGV
NTDVLIGVLSRVARLREKRWRETEGADRLSPLRLVIMSATLRVADFAENATLFATPPPVI
HIGARQHPVTVHFSRRTVSDYVGEAYKKVSKIHSRLPAGTILVFLTGQSEIMGLCRKLEA
KFGDKGKKGKKPIKVEDEGRLKPEVIEAEDVDLGGDRDLAADVDDGVAESDDEALDTEDE
DDLGIEDTDMPMTVLPLYSLLSQDAQMAVFRPPPDGHRLVIVSTNVAETSLTIPGVRYVV
DSGRAKERQYDHASGVQTFAVSWISKASAAQRAGRAGRTGPGHCYRLYSSALFEDHMPAF
GEPEILRMPIEGVVLNMKAMNIDAVINFPFPTPPDRQALRRAEALLTHLGALDRPSTTRM
IAGVQKTGSAGGKITDLGRAMAAYPVSPRFAKMLAVGKENGCLSFVIAIVAGLSVGDPFV
HENALEADSDEEGERGAELAGITSDSVRDKERRRDVRSRFFKRHAAFDSGESDMFKLLSA
IGAYEHTPTTSFCAEYFLRPKAMQEIQQLRGQIARIAGISLSRMAPPSSKERKILRQILC
AGFIDQVAVLESIASKKGSSAHSSARGVPYRALGVPEPVYLHPSSVLFHHTPPDFVVFSE
VVRTARVCLKGVTKVQASWLAVLGKDMCSFSRPLETPGMRAKSLTATEREVVVVPHFGDL
GVDLPPVKRKQRREGTRWVTLEE
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgcccccaccagtgagggaacggtacaattccaaggcccgaggctccgttgctggaggg
agctctcacaagaaccgcaagcgcaaggccaagcgcgagggcgaaccggaagaggctaag
ctcgcgcagccgcatcatgaggcaggcatgtcgagcaagaagcgcaagcggctcgattcg
tacattgcaacgagcatggcgatggtctcgtcggctggactcgggcagaatccctttgct
ccacctacggcgcttcagcgcgccgagattgctgaggataaggcagtacgacgggggatt
gagaggctgaagaggcgacatggcgaggccgacagcgactcggaggatgaaggaaggagg
agagtcgaagttgtggccacggtggccgggcaggaggagattgagacgaccgtgttggag
accaagggcgagaggaaagcgcgagagaaggcggaggcgcgcgggagcggcaagctcaag
atgcccaagaaggcgggatggaacccggagctgaagacgaagggcgactcgtcgtccgag
tttgactcgtccgactcgggagaggacatcgagtctgaggcagaggcagagaaagtcgag
gagccgaaggagcttccaaagcccgcccactcggcgctgaagccggtaggcggcgccgtg
aagcctgcagctgggattgcgcccaaggcctccaccgggagtgcgctgaaacctttcaac
gggagtgctctgaagccctcaactgggagtgctctgaagcctacagccggtagcgcgctg
aaaccgtcccccggcggcgcgcttaaggcgaacgtcggaggtgctctcaagactgccgcg
gacgggtcggcataccagccccgcgttgtcactcgcggaccgaagaagtttgcgcccgct
cgccgcaggcaggagagcagcgagattagcgacggcggcgaagattcggacggcgacgat
tccgacgacgaagattcggacgatgagagcgacgacgacgaggacagcgacgacgaggag
gacagcgacgacgaggaggacagcgacggggccagcgaggaggggagcgagggggagtcc
gagagtgagggggacgattccgacgagcagatggaagaagacggtgacaccgacgttgca
cccaagcaaaaggtcaacttcaaagagtgggcgctcaagcagatgggttcgggggacgct
gagaagagccttgccccggacctcctctcggcgcccgtccagccgaagaaaacaccagcc
ccgaagactggagagttcgtcgggcctatgggtgctgcataccacatccccgccacctcg
ctgctcactggtgatgagggtttggtggccagacccgctctcaagcgccgaccttcggtc
gtcgaggcgcggatggagcttcctatcttggccgaggagcagacgatcgtcgaggctgtg
cgcatgcacccagtcgtgatcatctgtggcgaaacgggttcaggaaagacgacgcaggtc
ccccaaatgctctacgaggccgggttcggtttcgcgggcagcgcgaatcccggcatggta
gcggttacccagccgcgccgtgtggcggccgtttctttggccgagcgcgtgcgtgacgag
ctcggcttccccccttcctcgggggtggttgcgcaccagattcggtacagttccacaacg
gcgccggatacagcgatcaagttcatgacggacggtgtgcttctgcgtgagctggccaac
gacttcctcctctcccggtacagtgtggttgtcgtcgacgaggcgcacgagcgcggtgtg
aacacggacgtgctcatcggtgtgctctcgcgtgtcgcgcgcttgcgcgagaagcgctgg
cgcgagaccgagggtgctgaccgcctctcgcccctccgcctcgttatcatgtctgctacg
ctgcgtgtggcggacttcgctgagaacgccacgctcttcgccacgcccccgccggtcatc
cacatcggcgcgcgccagcaccccgtcacggttcacttctcccggcgtacagtgagcgac
tacgtcggcgaggcctacaagaaggtgtccaagatccattcgcgcctgcccgcgggaacg
attctggtgttcctcacgggccagagcgagatcatggggctgtgccgcaagctcgaggcc
aagtttggcgacaagggcaagaagggaaagaagccgatcaaggtggaggacgaggggagg
ctgaagcccgaggtgattgaggccgaggacgtcgatctgggcggggaccgcgatctagcc
gcggatgtcgacgatggcgtcgctgagtcggatgacgaggcccttgacacggaggacgag
gacgacctcggcatcgaggacacggacatgcccatgactgtgctcccgctctactctcta
ctgtcgcaggatgcacagatggccgtcttccgccctcctcccgacggccatcgtctcgtg
attgtgtcaacaaacgttgccgaaacgtccctcaccatcccgggggtgcgctacgtcgtc
gactcgggccgcgccaaggagcggcaatacgaccacgcgtcgggtgtgcagacctttgca
gtgagctggatctccaaggcgagcgcggcgcagcgtgcgggccgtgcgggccgtaccggt
ccaggacactgttaccggctctactcgagcgcgctatttgaagaccatatgccggccttt
ggcgagcccgagatcctgcgtatgccaatcgaaggcgtcgtcctcaacatgaaggcgatg
aacatcgacgccgtcattaacttccccttcccgaccccgcctgaccggcaagcgctgcgc
cgcgccgaagccctcctcacccatcttggggcactggaccggccctctaccacccgaatg
atcgccggcgtacagaaaaccggaagcgcgggaggaaagatcaccgacctcggccgcgca
atggcagcgtaccccgtctcgccgcgtttcgcaaagatgctcgcggtgggcaaggagaac
ggctgcctgtcattcgtcattgccatcgtggcgggattgagcgtcggcgatccgtttgtc
catgagaacgctcttgaggccgactcggacgaggagggagagaggggggccgagctggct
ggaatcaccagcgattccgtgagggacaaggagaggaggcgcgacgtgcgttcccgcttc
ttcaagcggcacgcggcattcgactcgggcgaaagcgacatgttcaagctcctctctgcg
atcggggcatacgagcatactccgaccacctctttctgtgctgaatacttcctccgccca
aaggcaatgcaggaaatccaacaacttcgtggacaaattgcccggatcgcaggcatctct
ctctctcgaatggcgcctccctcatcaaaggaacgcaagattctgcgccagatcctctgc
gccggctttatcgaccaagtggccgtcctggagtctatcgcatccaagaagggctcatcg
gcccactcgtcggcccggggcgtaccataccgcgcattaggtgttcccgaacctgtatac
ctccacccgtcgagtgttctgttccaccacacaccacccgatttcgttgttttcagcgaa
gtcgtacgcacagcacgagtgtgtctcaagggcgttacaaaggttcaggcaagctggttg
gccgtgctgggcaaggacatgtgtagcttttctcggccgcttgagacgcctgggatgcgg
gcaaagagtttgacggctacggagagggaggtggtggttgtgccacactttggggatttg
ggggtggatttgccgcctgttaagcgcaagcagaggagggaggggacgagatgggttacg
ttggaggagtag
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