Cutaneotrichosporon cavernicola: CcaHIS019_0303680
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Entry
CcaHIS019_0303680 CDS
T09540
Symbol
SPB4, CcaverHIS019_0303680
Name
(RefSeq) uncharacterized protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ccac
Cutaneotrichosporon cavernicola
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccac03009
]
CcaHIS019_0303680 (SPB4)
Enzymes [BR:
ccac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CcaHIS019_0303680 (SPB4)
Ribosome biogenesis [BR:
ccac03009
]
Eukaryotic type
Pre-60S particles
Helicases
CcaHIS019_0303680 (SPB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
85494168
NCBI-ProteinID:
XP_060455563
UniProt:
A0AA48IGP4
LinkDB
All DBs
Position
3:join(963154..963327,963364..964131,964177..965367)
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AA seq
710 aa
AA seq
DB search
MPRPTPRAPAFGGAWTSLNPALTPWIADVIAAQGFERMTPVQAGTIPRAVKNQDCVVEAV
TGSGKTLAFVVPVLERIVRNEHKYRKGEVAAVVIAPTRELASQIHDVFNTFLSTWTPKEP
TPVDGEEGPPPPPPEYPLACLVTGGTAAPYESFFNQASNILVGTPGRLASFLLSPRGMSA
VRVGNLDVLVLDEADRLLSAPDHRRDVERIMRHLPKQRRTHLFSATMTDAVEDLVGVGLR
NPVRIVVNLKDKRTGESAVERRVPMGLANTFLVCGLADKTLQLLRVLQREAKVHEAAKFI
VYFSTGAAVDYFYRILSRLPEIDKFALTSLHGDLPPRVRDAALSGFNAHPSSHLTPAVLL
CTDVAARGVDFPDIDVVIQYDAPTDPKTFSHRVGRTARAGRAGRAVILLTRGREEQYVDF
LSVRKIPLVPHAYIGADFETAEAPLPADPDSLALLQRMRDVVLSDRDLADRGARALVSCV
HAYTKHEASFIFRPKDIDYAALGTAFGLLRLPVMPEVRDWRRRCEKAEKKRAEEGKDKDK
AGEEEEVEEVEETEQVAQLVWTDAEVDWNALAYTDKKREAQRQATLAEKAAKRASGELDA
EREHERKKRKVRAEVNSAWSGKKDQRVRKEERREKKDKKAEAAWARRINEGLLEEDAPAP
EKRAGKRKVAKDESDQEDLADEYRALKKEVKSTRGRVEKKEAAGMFDDLD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgccccggcccacaccacgcgccccggcctttggcggtgcatggaccagtctcaacccc
gcgcttacgccgtggatcgcggacgtgattgccgcgcagggctttgagcgcatgacccca
gtgcaggcaggtacgattccccgcgcggtcaagaaccaggactgtgtggttgaggccgtc
acgggatcaggcaagacgctggcctttgtcgtccccgtcctcgaacgcattgtccgcaac
gaacacaagtacaggaagggcgaggttgcggccgttgtcattgctcctacccgcgaactg
gcctctcaaatccacgacgtcttcaacaccttcctctccacatggacacccaaagaacct
acccctgttgatggcgaggaaggaccccctcccccaccgccagagtatccactggcatgt
ctggtgacgggcggcaccgcggctccttacgagtcgttcttcaaccaagcctccaatatt
ctggtcgggacgccaggccgcctcgcatccttcctcctctcaccacggggcatgtccgct
gtccgtgtcggcaacctcgacgtactggtgctcgacgaggctgaccgcctcctctccgcc
ccagaccaccgacgagatgtcgagaggatcatgcgccatctccccaagcagaggcggaca
cacctcttcagcgcgaccatgaccgacgcggtcgaggacctcgtcggcgtcggattgcgc
aatcctgtccgtatcgtcgtcaatctcaaggataagcggacgggcgagagcgcggtcgag
cgtcgcgttccaatggggctggccaacaccttcctcgtgtgtggactggccgacaagacg
cttcagctcctccgtgtcctccagcgcgaagccaaagtacacgaggcagcaaagttcatc
gtctacttttctaccggcgccgccgtggattacttctaccgcatcctttcccgcctccca
gagatagacaagttcgccctcacctcactgcacggtgaccttcctccgcgcgtgcgcgat
gccgccctgtctgggttcaacgctcacccatcctcgcacctcaccccagccgtcctgctg
tgtaccgacgtcgcggcccgcggcgtagactttcccgatatcgacgtcgtgatccagtac
gacgcgccaacagatcccaagaccttttctcatcgcgtgggccgtaccgcgcgcgcagga
cgggctgggcgcgcagtcatcctcctcacccgcggtcgggaggagcagtacgtcgacttc
ctgagcgtgcgcaagatccctctggtgccacacgcctacatcggcgcggacttcgagaca
gccgaggcgcctctccccgccgaccccgactcacttgccctcctccagcggatgagagac
gtcgtgctctccgaccgcgacctcgctgatcgcggggcgagggcgctcgtgagttgcgta
cacgcgtatacaaagcacgaggcgagcttcatcttccggccaaaggatatcgactacgcc
gcgctcggcacggcgttcgggctcctgcggctgcctgttatgccggaagtgcgggactgg
cgccggcggtgcgagaaggctgagaagaagcgcgcagaggaggggaaagacaaggacaag
gctggggaggaagaagaggtcgaagaggtcgaagagacggaacaagttgcgcagcttgtg
tggaccgacgcagaggtcgattggaacgcgctcgcgtacacggacaagaagcgggaggct
cagcgccaagcaactctggctgagaaggcggccaagcgggcgtctggagagctcgatgca
gagcgcgagcacgaacggaagaaacgcaaggtgcgcgccgaagtcaactctgcgtggagc
gggaagaaggaccagcgggtacggaaagaggagcggcgggagaagaaggataagaaggct
gaggcggcttgggcgcgccgcatcaacgaggggctgttggaggaggacgcgccggcgccc
gaaaaaagggcagggaagcgtaaggtggccaaggacgagagcgaccaggaagacttggcg
gacgagtaccgcgcgctcaagaaggaggtcaagagcacgcggggacgggtggagaagaag
gaggccgcgggcatgtttgacgatctcgactag
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