KEGG T09540: CcaHIS019

Cutaneotrichosporon cavernicola: CcaHIS019_0306240

Entry

CcaHIS019_0306240 CDS       T09540

Symbol

RPB8, CcaverHIS019_0306240

Name

(RefSeq) uncharacterized protein

K03016

DNA-directed RNA polymerases I, II, and III subunit RPABC3

Organism

ccac Cutaneotrichosporon cavernicola

Pathway

ccac03020

RNA polymerase

ccac03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:ccac00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CcaHIS019_0306240 (RPB8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    CcaHIS019_0306240 (RPB8)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccac03021]
    CcaHIS019_0306240 (RPB8)
   03400 DNA repair and recombination proteins [BR:ccac03400]
    CcaHIS019_0306240 (RPB8)
Transcription machinery [BR:ccac03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CcaHIS019_0306240 (RPB8)
  RNA polymerase III system
   RNA polymerase III
     CcaHIS019_0306240 (RPB8)
  RNA polymerase I system
   RNA polymerase I
     CcaHIS019_0306240 (RPB8)
DNA repair and recombination proteins [BR:ccac03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CcaHIS019_0306240 (RPB8)

SSDB

Motif

Pfam:

RNA_pol_Rpb8 RNA_pol_RpbG CENP-I

Other DBs

NCBI-GeneID:

85494424

NCBI-ProteinID:

XP_060455819

UniProt:

A0AA48I6E9

LinkDB

Position

3:complement(join(1657768..1658199,1658247..1658297))

AA seq 160 aa
MNDDRPNVIFEDRFTVLAVDEDGKKFDRVSRIKAESRDMGMQLHLDIAIELYPLQKDEVF
SLLLARSLKPEDDVAEEGDGDGDAPRKIKRELWRAEDQGLANDYDYVCQGKVYKFDDSVR
GDNQTTAYISFGGLLMALRGSFRHLAGVTVGENVYLLMRK

NT seq 483 nt +upstreamnt +downstreamnt
atgaacgacgaccgcccaaacgtcatcttcgaggaccgattcacggtgctggccgtggat
gaggacgggaaaaagttcgaccgcgtgtcgcgcatcaaggccgagtcgcgcgatatgggg
atgcagctccacctcgatattgccatcgagctgtatccgctgcaaaaggatgaagtgttc
tcgcttctcctcgcacggtcgctcaagcccgaagacgacgtcgctgaggaaggggacggg
gacggggacgcgccgcgtaagattaagcgcgagctgtggcgggccgaagaccagggactg
gccaacgactacgactatgtctgccagggcaaggtgtacaagtttgacgatagtgtgcgc
ggcgataaccagacgacggcatatatctcgtttggcggtctgctcatggcgctgcgcggt
agtttccgccacctggcgggagttactgttggcgagaacgtttatctcctcatgcgcaag
tag

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