Cutaneotrichosporon cavernicola: CcaHIS019_0307840
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Entry
CcaHIS019_0307840 CDS
T09540
Symbol
DBP10, CcaverHIS019_0307840
Name
(RefSeq) uncharacterized protein
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
ccac
Cutaneotrichosporon cavernicola
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccac03009
]
CcaHIS019_0307840 (DBP10)
Enzymes [BR:
ccac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CcaHIS019_0307840 (DBP10)
Ribosome biogenesis [BR:
ccac03009
]
Eukaryotic type
Pre-60S particles
Helicases
CcaHIS019_0307840 (DBP10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
85494584
NCBI-ProteinID:
XP_060455979
UniProt:
A0AA48I3S9
LinkDB
All DBs
Position
3:join(2078528..2078636,2078684..2079068,2079106..2079201,2079236..2080370,2080421..2080506,2080551..2080896,2080938..2080982)
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AA seq
733 aa
AA seq
DB search
MSTHDFRADWITGKDNAPSSDNPKKTKSSGGTWATLGVSQPLARALNLRGFKNPTPIQRA
ALPPAMANPSKDVLGMARTGSGKTLAYLIPLIQSLGGARKESSGIRSLILCPSRELAVQV
LKVGKDLSRSLAGANKGAQPLKWSIIMGGESLDAQFEAMSANPDIVIATPGRLLHLAVEM
DLDLRQVQVVVYDEADHLFEMGFEVQLREILHRLPTTRHNLLFSATLPTTLAEFAKAGLN
NPAFIRLDTEHRISPDLELAFLSVKPDEKEAALLVLLREVIHIPVASTATDDSPRAIIFA
STKHHVEYISTLLKAANYRTSYIYGSLDQVARQQQLRHFRDGKSEVLVVTDVAARGLDIP
AMGHVINFDFPSGVRVFVHRVGRTARAGQKGHAWSLVTRDDLPYLHDLETFLERPIVSDA
GAFGTVPRDSLEATLEYILHNLETSESQLESLRSVMKRGQAMFERSRNKASREGYRALKA
GKESRNTTRTHSAFLSLEEENGGEEKRATLLAAIQSYNPHETIFEVGARGGQQATAVVMK
QRRQALARSRARRQQPLASEGGVDLGFDPADTDGDIHVTKPTKSYRDPNFFLPHENVETN
RSKGYSLSEGTSFAEQARSATMDLNADDADPQRAQKASQLKWDKKRKRFVKDTPGEDNKK
MIRGESGALLPATFKSGRFAEWKKTAHRLSGQRTGPQSQNSAGLANAETILKGRREKEKR
QQKNGRISKKRRL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacacacgacttcagagctgattggatcactggcaaagacaatgctccttcgtcc
gataatcccaagaagacaaagtcttcgggcggaacgtgggccacgctcggagtctcccag
ccactcgcccgcgccctcaatcttcggggtttcaagaaccccaccccgatccagcgggcc
gctcttcctccagccatggccaacccttccaaagatgttctcgggatggcacgcactggc
tcggggaaaacgctggcttacttgattcccctcatccagtcgcttggaggagctcgcaag
gaatcctcaggcattcgatccttaatcctgtgtcccagccgtgaacttgccgtccaagtc
ctcaaagtcggcaaagacttgtcgagaagcttggccggggccaacaaaggcgcccaacca
ttgaaatggagcatcatcatgggcggcgagtcgcttgatgcccagtttgaggcaatgtct
gcgaaccctgatatcgtcatcgctactcctggtcgcttgctccatctggctgttgagatg
gacctcgacctgcggcaagtgcaggtggtggtttacgatgaagctgatcacttgttcgag
atggggttcgaggtgcaactgcgcgagattctgcatcgcctgccgacgacgcgacacaac
ttgctgttctcggcgacacttccaacgacgctcgcagagttcgccaaagccggcttgaac
aatccggcattcatccggctggacactgagcatcggattagccccgacctcgaacttgct
ttcctttcggtcaagccggacgagaaagaggcggcactcctcgtactcttgcgcgaagtc
atccacatccccgtcgccagtactgccacggacgacagccctcgcgccatcatctttgcg
tctacaaaacatcatgttgagtatatctcgactctactcaaagcggcgaactaccggact
tcctacatctatggttccctggaccaagttgctcgccagcagcaacttcgccacttccgc
gacgggaagtcggaggtactcgttgtcaccgacgtcgcagcccgagggcttgacatcccc
gcgatgggccacgtcatcaatttcgacttcccgtcgggagtgagggtctttgtgcatcgg
gttggccgcacggcgcgtgctggacaaaagggtcacgcctggagcttggtcacccgcgat
gacctgccatacttacatgacctagaaaccttcctggagcgtcccatcgtctccgacgca
ggcgctttcggtacagttcctcgagacagcctcgaggcaactttggagtacatcctccac
aacttggagacgtctgaatcccaacttgaatcattgcggagcgtcatgaagcgtggtcag
gcaatgttcgaacgatcccggaacaaggcgagtcgtgagggttatcgcgctctcaaagct
ggcaaggagagtcggaatacgacccgtacacattcggctttcctatccctcgaagaagag
aacgggggggaagaaaagagggcgacactcctcgccgcgatccaatcttacaaccctcac
gagacgatcttcgaggtgggagcgcgtggtggccaacaagcaacggcagtggtgatgaag
cagcgccgacaggcgttggctcggagtcgggcgcgcaggcaacaacctctcgcctctgaa
gggggagttgatctggggtttgatccagccgacactgatggcgacattcacgttacgaaa
cccaccaagtcttaccgtgatcccaacttcttcttgccccatgagaatgttgagacaaac
cgatccaaaggctactccctctccgaagggacctcattcgcggagcaggcccggtctgcg
acgatggatctgaatgccgacgatgcagacccgcaacgtgctcaaaaagcgagccagctc
aagtgggacaagaagcggaagcggttcgtcaaggacacccctggcgaggacaacaagaag
atgatcaggggcgagagtggcgcactgcttcccgccacattcaagagcggccgcttcgct
gaatggaagaagactgcacaccgactctcaggccagcgcactgggccgcagtctcaaaac
tcggctggcctcgcgaacgctgaaaccattctcaagggccggcgtgagaaggagaagcgc
cagcagaagaatggtcgcatttccaaaaagcgtcggttgtag
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