KEGG   Cutaneotrichosporon cavernicola: CcaHIS019_0308050
Entry
CcaHIS019_0308050 CDS       T09540                                 
Symbol
SMC5, CcaverHIS019_0308050
Name
(RefSeq) uncharacterized protein
  KO
K22803  structural maintenance of chromosomes protein 5
Organism
ccac  Cutaneotrichosporon cavernicola
Brite
KEGG Orthology (KO) [BR:ccac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccac03400]
    CcaHIS019_0308050 (SMC5)
DNA repair and recombination proteins [BR:ccac03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     CcaHIS019_0308050 (SMC5)
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 NOCA1_mid AAA AAA_27 LURY1 AAA_21 AAA_29 COX6A ABC_tran
Other DBs
NCBI-GeneID: 85494605
NCBI-ProteinID: XP_060456000
UniProt: A0AA48IBQ9
LinkDB
Position
3:join(2143941..2144182,2144218..2144383,2144457..2144683,2144725..2144878,2144914..2145018,2145055..2145200,2145235..2145346,2145384..2145563,2145600..2145721,2145761..2145898,2146056..2146146,2146194..2146292,2146325..2146505,2146541..2146683,2146726..2146798,2146836..2146960,2147063..2147147,2147183..2147298,2147335..2147454,2147498..2147779,2147816..2148151)
AA seq 1080 aa
MSQRRLKRRVQDVSDDDEFEAQSPVRRRARNSSMDASQSPSRVKGKGRAIVPDSDEGTES
GDDEFVVQQAYRPELERGEDGYVAGSIVRVKITGFMTYDHVEFRPGPHLNMILGPNGTGK
SSIAAAIAIGLGFHPKVMGRAHDVRSYVKQGTEVAEIEIELKGHKRKANPVIWRRFGRDS
DKSEWKLNSKASTRKEIQNLIQSFGVQADNLCSFLPQDKVADFAKMNPVTVLKETMRAAG
DPHLSQWHEDLVANGKTAREVETSLTAKTQRRDTLRLQVDELEPEVRNYERQQGLKKQLH
IAEVEAASVLWKDSMAKAAEHKKAANKVKEKLKSMHRQQAPLRELQQAQVQKEKKAQGVR
ARLEDGLRREAADLEKSDRSHRSAMRHADGLAGELEAVNDNARGIRDQIRNTESLIRKQQ
EILESPDSDKEAIRSQLDVKLKAQQKAGSDKRAADAQRQNQHTELERIRSELSDITVNMN
LLSQEEAENSNVEAHRRRAVFNSDPSIEFAVTWIENNQDKLRDRVLYPPLMMRTPNGGAV
RLNLATIEAANPGPPHAPPDQMADLGLDGFVVDFMEAEPAMRTFLCQVGQLDRIGITLKP
HNQLSPERLLRANILTWFSSTHFSRAVQSRYGKRDMQITTNALPAGQRSFLGMTVDQDAV
KRIADQMADLRRRQRALEQPQAKVKLDIEQSNAKIQAFKDVQGQSEVDIRKLREELNKSD
LAGQNLERYQNRLKDLRSRPTAEAQRKSLRDQIETHAKSAFEAWKDYMAASNLLAVDEVS
NKREGRIETLGKEHDEHVEALKRAKDRQTYLLNNVKQILDQMPNEYRGEAQAAGANTTKS
VEEARAAVHDIQAQLELSLNVDGNTIERYHRLKDDLEAKEHDVSTTEAQFEQLRHAVSSI
LSNFNPALDSLVQETSAKFSSAFERIGCTGEVRVSRVPGNYAEWGIEILVSYRDGQDLEV
LRASRQSGGERSLATVTYLMSLSEMARTPFSLVDEINQGMDARAERSVHNQMVKVTCTGG
DNTGQYFLITPKLLTDLDYHENMRVLTVSNGSYLPDSADINFGALSARLATYKHNMVATR
NT seq 3243 nt   +upstreamnt  +downstreamnt
atgtctcagcgccgccttaagcgccgcgtacaagacgtatcggatgacgacgaattcgag
gcgcagtcgccagtaaggcgccgcgcgcgcaacagctccatggacgcgtcccagtcccca
tcacgagtcaagggcaaaggccgggccatcgtcccggacagtgacgaaggcacggaaagc
ggcgacgacgagtttgtcgtgcaacaggcctaccgtccagagctggagcgcggagaggac
ggctacgttgccggctcgatcgtgcgtgtcaagatcacgggtttcatgacctacgaccac
gtcgagttccggcctggtcctcatctcaacatgatcctagggcctaatggcactggcaag
agctctatcgccgctgccatcgccattggcctcggcttccacccaaaggtgatgggccgc
gcacatgatgtgcgctcatacgtcaagcaaggcacagaggtcgccgagattgaaattgag
ctcaagggccataaacgcaaggcgaatcccgtcatctggcgccggttcggacgcgactcg
gacaagtcggagtggaagctcaacagcaaggcgtccacgcgcaaggaaattcagaacctc
attcagagctttggcgtccaagccgacaacctctgctccttcctcccccaggataaggtc
gccgactttgccaagatgaaccccgtcactgtgctcaaggagacgatgcgcgcggcgggt
gacccgcatctatcacagtggcacgaggacctggtcgcaaacggcaagacggcgcgggaa
gttgaaacctctctcactgcgaagacgcagaggcgtgacacgctgcgacttcaggtcgac
gaactggaaccggaagttcgcaactacgagcgacagcagggtttgaagaagcagctccac
attgcagaggtagaggctgcgtcggtgctatggaaggactccatggccaaggccgcggaa
cacaaaaaggcagcaaacaaggtcaaggagaagctaaagagcatgcaccggcagcaagcc
cctcttcgtgaacttcaacaggcacaagtgcagaaggaaaagaaggcacagggagttcgc
gcaaggctcgaggacggccttaggagagaagcagcggatctcgagaagtctgaccggtct
catcgcagtgctatgcgtcatgctgatggtctcgccggcgaactcgaggccgtcaacgac
aatgccaggggcatccgcgaccagatcaggaacacggagagcttaatccgtaaacagcag
gagatcctcgaaagccccgactcggataaggaagcgattcgatcacagctcgacgtcaaa
ctcaaggcccaacaaaaggctggtagcgacaagcgagcggcagacgcacagagacagaat
caacatacggagctggagcgcattcgcagcgaattgagcgacatcaccgtcaacatgaac
cttctcagccaagaggaggccgagaactccaatgtcgaggctcaccgccggcgagcagtg
ttcaacagtgacccttccatcgagttcgccgtgacgtggattgagaacaaccaagacaaa
ctccgggaccgcgtgctctaccctccacttatgatgcgcactccgaacggcggggctgtc
agactcaaccttgctaccattgaggcggcgaatcctggcccgccccatgcaccgcctgac
caaatggcagatctcggactcgatggctttgttgtcgacttcatggaggcggaacctgcc
atgcgcactttcctatgccaagttggtcaactggatcgcatcggtatcactctgaagcca
cacaaccaactcagccccgagcgtctgcttcgggcaaacatcctgacctggttctcatca
acgcatttcagccgtgcagtccagtcgcgatacggcaaacgtgatatgcaaatcacgaca
aacgcattacctgctggccagcgctccttcctcggcatgactgtggatcaggatgctgtc
aagcggatcgccgaccaaatggccgaccttcggcgacgccagcgcgctctggaacaaccg
caagccaaggtcaagcttgacattgagcaatccaacgcaaagatccaggcgttcaaggat
gtccaaggtcaatctgaagtcgacatccggaagctgcgcgaggagctcaacaagtcagac
ctggctggacagaatctggagcgttatcagaaccgtctgaaggaccttcgtagcagacca
accgcggaagcccagcgtaaaagcctccgcgaccagatcgaaacgcatgccaagagcgcg
ttcgaggcgtggaaggactacatggctgcaagtaatctgctagctgtcgacgaggtctcc
aacaagcgtgaagggagaatagaaacgttgggcaaagaacatgacgagcacgtggaggca
ctgaaacgggccaaggaccgccagacgtacctgctcaacaatgtgaaacaaattctcgac
cagatgcccaacgaataccggggagaggcccaggcagccggtgcgaacacgacaaaatct
gtggaggaggccagggctgccgtccacgacatccaggcgcagctcgagctatctctcaat
gttgacgggaataccatcgagcgatatcaccgtcttaaggacgacttggaagccaaggag
cacgatgtttcgacaaccgaggcgcagtttgagcagctccgtcacgcagtctcctctatc
ttgtccaacttcaaccccgcgctcgatagtctggtgcaagagacgagtgcaaagttttcg
tcggcattcgagcgtatcggttgtacgggcgaggtgcgcgttagtcgcgtacccggcaac
tacgccgagtggggaatcgagattctcgtcagctaccgcgacgggcaggatctcgaggtt
ctgagggccagccgccagtctggaggagaacgctctctcgccactgtcacatacttgatg
agtctttccgagatggctcgcacgccgttctcgctcgtcgacgaaatcaatcagggaatg
gacgcgcgcgcagagcgcagtgtgcacaaccagatggtcaaggtgacctgcacaggcggt
gacaacactgggcagtatttcctgatcacgcccaagctcctcaccgacctcgactatcac
gagaatatgcgtgtcctcactgtcagcaacgggtcgtacctacccgactcggcagacatc
aactttggcgcgctctctgcccgtctggcgacctacaagcacaacatggtcgcgaccaga
tag

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