Cutaneotrichosporon cavernicola: CcaHIS019_0308220
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Entry
CcaHIS019_0308220 CDS
T09540
Symbol
CcaverHIS019_0308220
Name
(RefSeq) uncharacterized protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ccac
Cutaneotrichosporon cavernicola
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccac03016
]
CcaHIS019_0308220 (CcaverHIS019_0308220)
Enzymes [BR:
ccac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CcaHIS019_0308220 (CcaverHIS019_0308220)
Transfer RNA biogenesis [BR:
ccac03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CcaHIS019_0308220 (CcaverHIS019_0308220)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-GeneID:
85494622
NCBI-ProteinID:
XP_060456017
UniProt:
A0AA48ID60
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All DBs
Position
3:join(2199777..2200273,2200315..2202922)
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AA seq
1034 aa
AA seq
DB search
MRPQFELPRRLATVAPRRFQTTKPVRRKRELPVEEASFDRNPDASKASIQRQPYKVSALG
AEIPDDIPQVPLHIDQIESRRLRWYMRTMNEDKMTPEDEDRLARAMERTVKPSRPQIAFK
AEDAGASVERKDFFAIPGEDGYNSGAISAGEITPGLEPGRVVEIRREAGNYVGVILAPIT
VALKERLLLLQSTGEIWPVGVNDIQFVMPKSLIPEEVSSKAWHPDLLQMWKSGDDIGSGE
FDESSIIGAEEAGEMLAARRKIATVLRRVLRETERMQGRLLSGSVDSGRGGGMDALWEGL
VPADPNTRGSISAAAAAEFLLNRSEAQAEDGENRITVRPGTLPAYAAHRMLMDRPDLFLG
ADISMWEEQTFLVRSRADVELHNRVERWVTTQDPIFLNFVDKAQKVRAAIKAGGELPEWT
EDERDILYTLTMALFERRGTQQPHNVTLACSIAKWFSSDVNDIMSLGFMGPLLNELGVLP
TYDSAMPNKLIESASRSASMAGFVMPTEFGETAKEPVAADAALDALRQEFSHRVYVIDDP
TALELDDGIALEPAGGDQYWVHMYVADPTRFIEREGMLSKAASVLGTAHYLHEGTVPLLP
PSLAGGKLSLGAADGQPTMVFSAKVDTQGTVHDWKVGMGFTKNTVVTTYDAVNDALGIEP
VKKTYPFGKLRDDLIVRPPLRALDTLEAGHNTELQTLMQLSLALRAVRYKDAGFEWVGST
PSVGVYNIGPVPTNLHDREKFPAAPRASPALDKVQLSYEVVQRPLATSATTMVTEFMVLA
NQIAAWFCDEHNLAAAFRGSGLVTNTNATPPELTVEKLLAQRTPGTGYVGMDQAKIGSLL
FPTTQLSPTPIPHWLMGLSASKGYMWATSPLRRYDDMLAHWQIKGALAAAAGVSGGEGVL
FKEAIWPLIKRTSYGQQRGRTAQRTDNRYFTSLLFEQRASGPLPEGYEVDPAEAVDLHAP
MDATVTSRPYYATYQDNGPYFVDISVPTLGLVSSVGFGTQAEAQRRAPIGATIKVVFHQT
AIWPLPRISMKNAA
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgcaattcgagttgccgcgccgactggcaaccgtcgctccgaggcggttccaa
accactaagcctgtgcgccggaaacgcgagttgcccgtcgaagaggcctcgtttgatcgc
aaccctgatgcgtccaaggccagcatccagcggcagccctacaaggtctcagccctcggt
gccgagatcccagacgacatcccccaggtaccactgcacattgaccagatcgagtcgcgt
aggttacgatggtacatgcgtaccatgaacgaggacaaaatgactcccgaagatgaagac
cgcctcgcccgtgctatggagcgtactgtcaagccttctcgaccacaaatcgcgttcaag
gccgaagacgccggtgccagcgtagagcgtaaagatttctttgctatccccggcgaggac
ggttacaactcgggcgcgatcagcgctggcgagatcactccgggcctcgagcctgggcgt
gtcgtcgagattcgtcgtgaggcgggcaactacgtcggagtcatccttgctccaattaca
gtggcactcaaggagcgtctgctgttgttgcagagtacgggcgagatctggcccgtgggc
gtcaacgacatccagtttgtcatgcccaaatcgctcatccccgaagaagtgagctccaag
gcctggcaccccgacctcctccaaatgtggaagtctggggatgacattggatccggagag
ttcgacgagagcagcatcatcggcgcagaggaggcgggtgagatgctggcggctcggcgc
aagattgcgaccgtcctccgtcgtgtcttgcgtgaaacggagagaatgcagggccgcctg
ttgagtggctcggtcgattcgggacgcggaggcggcatggacgcactctgggagggtctt
gtacccgcggacccgaacacgcgtggatcgatctcggcggcggccgccgccgagttcctt
ctcaaccgctcagaggcccaggccgaggacggcgagaaccggatcaccgtccggcccggg
actctgccggcgtacgcggcgcacaggatgctcatggaccgtccggatctgttcctcgga
gccgacatcagcatgtgggaggagcagacgttcctcgtgcgctctcgtgccgacgtcgag
ctccataatcgcgtggaacggtgggtgacgacgcaggatcccatcttccttaactttgtg
gacaaggcccagaaagtacgcgcagcgatcaaggcgggcggtgagctacccgaatggacc
gaggacgagcgcgacattttgtataccctgacgatggcgctgtttgaacggcgtggaaca
cagcaaccccacaatgtcaccttggcgtgtagcatcgccaagtggttctcgtcggacgtc
aatgacatcatgtccctcggattcatggggccgcttctgaacgaactcggcgtcctgccc
acatatgactcggccatgccgaacaagttgatcgagagcgcatcgcgttcggccagcatg
gccggtttcgtcatgccgaccgagtttggcgagacggcgaaagaacccgtagctgcggac
gctgcgctcgacgccctgcgtcaagagttctcgcaccgtgtgtacgtcatcgacgaccca
accgcgctcgagctcgatgacggcatcgcccttgagcccgctggcggcgaccagtactgg
gtgcacatgtacgtagcagatccaactcgcttcatcgagcgagaggggatgctctccaag
gcagcgagcgttctaggcaccgcccactacctccacgagggaacggtgccgttgctccca
ccctcgctggcaggcggcaaactgtcgctcggtgcggccgatggacagccgacaatggtc
ttttcggccaaggtggacacacagggaacggtgcatgactggaaggtcggaatggggttc
acgaagaacacggtggtgacgacgtacgacgccgtcaacgacgcgctgggcatcgagcct
gtgaagaagacgtaccccttcggcaaactgcgggacgacttgatcgtgcgcccgccgttg
cgcgcgctggacactctcgaggcggggcacaacactgagctccagacactcatgcagctc
tcgctcgcgttgcgtgctgtgcgctacaaggatgcgggtttcgagtgggtaggctcgacc
cccagtgtgggtgtttacaatatcggtccggtcccgaccaatctgcacgaccgagaaaag
ttccccgccgccccgcgcgcgagtccggccctcgacaaggtgcagctcagctatgaggtg
gtgcagaggccgttagccaccagcgcaacgaccatggtcaccgagttcatggtgctcgcg
aaccagatcgcggcgtggttctgtgacgagcacaaccttgcggccgcgttccgcggctct
ggcctcgtcaccaacaccaatgcaacgccaccagagttgacagtggaaaagctccttgcg
cagcgtacgcctggcaccggctatgtgggaatggaccaggccaagattgggtctcttctt
ttcccaacgacgcagctttccccgacccctatcccgcattggcttatgggccttagcgcg
agcaagggatacatgtgggcaacgtcgccgctgcgacgatacgacgacatgctcgcgcac
tggcagatcaagggtgcgcttgcggcagccgccggcgtcagtggaggagagggcgtgctc
ttcaaagaggcgatttggccgctcatcaagcgtacctcgtatggccagcagcgtggacgc
accgcccagcgcacggacaaccggtattttaccagtctgctgttcgagcagcgcgcttcg
gggcccttgccagagggatacgaggtcgacccagccgaggcggtcgacctccacgccccg
atggacgctacggtaacgagccgcccatactacgccacctatcaagataacgggccgtac
tttgtcgacattagcgtgcctacactcggattggtgtccagcgttggctttgggacacag
gccgaggcccagcgccgagcacccatcggcgcgaccatcaaggtcgtgttccaccagact
gcaatctggccgctgccccgcatttccatgaagaacgcagcttaa
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