KEGG   Cutaneotrichosporon cavernicola: CcaHIS019_0308870
Entry
CcaHIS019_0308870 CDS       T09540                                 
Symbol
CcaverHIS019_0308870
Name
(RefSeq) uncharacterized protein
  KO
K11098  small nuclear ribonucleoprotein F
Organism
ccac  Cutaneotrichosporon cavernicola
Pathway
ccac03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CcaHIS019_0308870 (CcaverHIS019_0308870)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccac03019]
    CcaHIS019_0308870 (CcaverHIS019_0308870)
   03041 Spliceosome [BR:ccac03041]
    CcaHIS019_0308870 (CcaverHIS019_0308870)
   03032 DNA replication proteins [BR:ccac03032]
    CcaHIS019_0308870 (CcaverHIS019_0308870)
Messenger RNA biogenesis [BR:ccac03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     CcaHIS019_0308870 (CcaverHIS019_0308870)
Spliceosome [BR:ccac03041]
 Complex A
  U1 snRNP components
   Sm proteins
    CcaHIS019_0308870 (CcaverHIS019_0308870)
  U2 snRNP components
    CcaHIS019_0308870 (CcaverHIS019_0308870)
 Complex B
  U1 snRNP components
    CcaHIS019_0308870 (CcaverHIS019_0308870)
  U4/U6.U5 tri-snRNP components
    CcaHIS019_0308870 (CcaverHIS019_0308870)
 Complex C
  U2 snRNP components
    CcaHIS019_0308870 (CcaverHIS019_0308870)
DNA replication proteins [BR:ccac03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     CcaHIS019_0308870 (CcaverHIS019_0308870)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 85494687
NCBI-ProteinID: XP_060456082
UniProt: A0AA48L2G1
LinkDB
Position
3:join(2371757..2371771,2371806..2371925,2372098..2372186,2372221..2372236)
AA seq 79 aa
MAAVAPVNPRPFLQDLTGKTVSVKLKWGLEYRGFLVSTDGYFNLQLTGTEEIEDGKSNGQ
LGEVFIRCNNVLYIREAKD
NT seq 240 nt   +upstreamnt  +downstreamnt
atggccgctgtcgctcccgttaacccgcgcccgttcctgcaggacctgactggcaagact
gtgtcggtcaagttgaagtggggcctcgagtaccgcggcttccttgtctcgacggacggg
tacttcaacctccagttgacaggtactgaggagatcgaggacggcaagagcaacgggcag
ctcggcgaggtgttcatccgctgcaacaacgtgctgtacatccgtgaagcgaaggattag

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