Cutaneotrichosporon cavernicola: CcaHIS019_0308900
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Entry
CcaHIS019_0308900 CDS
T09540
Symbol
RPA190, CcaverHIS019_0308900
Name
(RefSeq) uncharacterized protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CcaHIS019_0308900 (RPA190)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccac03021
]
CcaHIS019_0308900 (RPA190)
Enzymes [BR:
ccac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CcaHIS019_0308900 (RPA190)
Transcription machinery [BR:
ccac03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
CcaHIS019_0308900 (RPA190)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
85494690
NCBI-ProteinID:
XP_060456085
UniProt:
A0AA48IAG2
LinkDB
All DBs
Position
3:complement(join(2376045..2380850,2380886..2381045,2381080..2381264))
Genome browser
AA seq
1716 aa
AA seq
DB search
MDIAHPLHSEVTSLSFSFLSSEDIRSISVQRVENPILLDNLNMPTRGGLYDPKLGPMKKG
DICESCKLSYFDCPGHYGHIELPTPVFHPLFMNQCYQLLRGVCLYCHHFKMPEIILKRYV
ARLRLLDAGCLEEAHYVVHLAPSASASKQAEDGDPTDEDADADVSAESAAEFILRIETYV
KQVIKHKKKKNERDAYKDGLVYEERRRVLQEFGKKIWNRCSHCQAYGNTFRKEKAIKIVE
YDLTPKQKQANAVLNLKKPSASFGVNGRSLVNKKKKSDAMDVDEGIEASSASGSSGSEDE
MDVDDEDESEESEDQVDEGLDDDGIARTASGQVKGSRGRNERVMAAAEVRGHLRRLFQLE
SEICMLIYGRHGTPSARAHANPAPVADMFFMDVVPVTPTRFRPASMMGDDLFENAQNTLL
AELITTCERVQTLSQTLRDFKRLDKSPELAEKLKAFDETRSFALLLESLISLQHNVNSLI
DSTKNPKVMAQGKLPPPGIKQLLEKKEGLFRKHMMGKRVNYAARSVISPDINIETDEIGI
PPVFAKKLTYPEPVTPQNVHEMRRLVINGPKVHPGATIVQNEDGTQVSLDRMSPEQREAI
ANQLLTPQNDQFAGGSSTSIPPRNKKVYRHIRDGDIVILNRQPTLHKPSMMCHRVKVLHG
EKTIRMHYANCNSYNADFDGDEMNIHFPQNEIARAEAQMLANTDNQYLVPTSGNPLRGLI
QDHVVAGVWMCNKSTFFTRDQYYQLIYGALRTEDNYTGGGRIRTLPPAIFKPRPMWTGKQ
IFSTIMLNLTPDNAKGLNLISQNKIANSLWKRDDSKDKDMSEEQVIFVDGHLLVGILDKS
QYGASSYGLVHSVHELYGPYIANRLLAVLSRALTKYLQHTAFTCRMDDLILTDEGEKLRR
EILDAAKEDGVYTAMKYVGLPEGSSPDDPAAQANLKMRLEGILHDDSLMAGYDGVMQQKF
NKTTSKINNDVLPAHLIRPFPDNNMQTMTISGAKGSKVNASQISTLLGQQALEGRRVPTM
VSGKTLPAFKAYDTSARAGGYVANRFLTGVRPQEYYFHCMAGREGLIDTAVKTARSGYLQ
RCLIKHLEGVKVHYDHTVRDSDSSVLQFLYGDDAIDVTKSRHLTKFDFAARNHDSLLNKY
DPSAIAGKVDDSEAIDWSKKALKKPAKYEPAMSIYQPSRYLGSMSEAYARNVNEYIASNK
AGYIQPRKGETPPSAYASVRIPEREFTQLARVRYMRSLVDPGEAVGLLASQGVGEPSTQM
TLNTFHLAGHGAANVTLGIPRLREIVMTAARKPATPTMTLPLREHVEAGDADTFVKLVSR
LTLSEVVEKVTVTERLSGKTAEANNSRVRRYTVLLDFYPPEEYTDEYKITVDQLHDSLCT
SFADRVKRQIVNQLRTAIKAKEQDQAVGKGLRVRAGADIEEAPRRGRDDELDDDDEDSGQ
LKRARQARALEYEDDDEETGVQDLEDIIEAGQESESDDEDEEDDAATKAAWDAAADVLAE
QFKRASKYATDFHFDSRGKSAQFELQFPGQAPKLLLVDLVEQACREAVIHEIPSIGRCLK
NFDDKGVFSRSLTTEGSNIRGMWALADELIDLDKIGSNDVYAIHQTYGVEAARRTIINEM
TAIFGVYGIDVDYRHLTVIADYMTHSGGYSPFNRTGISHKSSPLLKASFETTVAFLSDAT
LHGDFDDLTSPAAKIVLGKPSGSGTGAFDVRAPTRM
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atggacattgcacaccccctccattcggaggtcacctccctctccttctcgttcctgtca
tccgaggacatccgctccatctcggtccagcgtgtcgagaaccccatcctcctcgacaac
ctcaacatgcccacacgcggcggtctgtacgaccccaagctcggcccaatgaagaagggc
gacatttgcgagtcttgcaagctgtcgtactttgactgcccgggacactacggacacatc
gagctgccaacgcccgtgttccacccactcttcatgaaccagtgctatcagctgctccga
ggcgtctgcctgtattgccaccactttaagatgcccgagatcatcctgaagcggtacgtc
gcgcgcctgcgcctgctcgacgctggatgcctcgaggaggcacactacgttgtgcacctt
gccccgtctgctagtgcgtcaaaacaagcagaggatggggacccgaccgacgaggacgcg
gacgcggacgtgagcgccgagagtgctgccgagttcatcctccgcatcgagacgtacgtc
aagcaggtgatcaagcacaagaagaagaagaacgagcgcgacgcgtacaaggatggactg
gtgtacgaggagcgtcgtcgtgttctgcaggagtttggcaagaagatctggaaccgctgc
tcgcactgccaggcttacggcaacacgttccgcaaggagaaggcgatcaagattgtcgag
tacgacctcacgccaaagcagaagcaggcgaacgcggttctcaacctcaagaagccgtcg
gcttcgtttggcgtcaacggccgctcgctcgtcaacaagaagaagaagagcgacgcgatg
gacgtcgacgagggcatcgaagcgagctcggcttctggcagcagtgggagcgaggacgag
atggacgtcgatgacgaagacgagtccgaagagtctgaggaccaggttgacgaaggtctc
gacgacgacggcatcgcgcgcactgcctcgggccaggtcaagggctctcgcggacgcaac
gagcgcgtcatggccgccgccgaggtccgcggacaccttaggcgactgttccagctcgaa
tcggagatctgcatgcttatctatggccgccacggcacgccctcagctcgtgcacacgcc
aaccccgctcctgtcgcggacatgttcttcatggacgtcgtgccagtcaccccgacgcgc
ttccgccctgcatcgatgatgggcgacgacctcttcgagaacgcgcagaacacgctcctc
gctgagctcatcaccacatgcgagcgtgtgcagacactcagccagacgctgcgtgacttt
aagcggctcgacaagtcgcctgagctcgccgagaagctcaaggcctttgacgagacccgc
tcgttcgcgttgctcctcgagtccctcatctccctacagcacaacgtcaacagcttgatc
gacagtaccaaaaaccccaaggttatggcgcagggcaagctcccgccacctggcatcaag
cagctgctcgagaagaaggagggtctattccggaagcacatgatgggcaagcgtgtcaac
tacgctgcgcgttcggttatctctcctgacatcaacatcgagaccgacgaaatcggcatc
ccaccagtgttcgccaagaaactcacgtaccccgagcccgtgacgccgcagaacgttcac
gagatgcgccgcctagtcatcaacgggcccaaggttcaccccggcgcgacaatcgtgcag
aacgaggacggcacgcaggtgtcgcttgacaggatgtcgccggagcagcgcgaagctatt
gccaaccagctccttaccccgcagaatgaccagtttgccggcggcagcagcacgtcgatc
cccccccgcaacaaaaaggtctaccgccacatccgcgacggagacattgtcatcctcaac
cgtcagccgacgctgcacaagccgtcgatgatgtgccaccgcgtcaaggtgctgcacggc
gagaagacgatccgcatgcactacgccaactgcaactcgtacaatgccgactttgacgga
gacgagatgaacatccacttcccgcagaacgagattgcgcgtgccgaggcccagatgctc
gccaacaccgacaaccagtacctcgtcccgacatccggtaaccccctccgtggtctgatt
caggaccacgtcgtcgctggagtgtggatgtgcaacaagtcgacgttctttacgcgcgat
cagtactaccagctcatctacggtgcgctccgcaccgaggacaactacactggtggtggc
cgtatccgtacccttccccccgccatcttcaaaccccgccccatgtggaccggcaagcag
atcttctcgaccatcatgctcaacctcacccccgacaacgccaagggcctcaacctcatt
tcccagaacaagattgccaacagcttgtggaagcgtgacgactccaaggacaaggacatg
tccgaggagcaggtcatctttgtcgacggccacctcctcgtcggtatcctcgacaagtcg
cagtacggcgcttcgtcgtacggtctcgtacactcggtacacgagctgtatgggccatac
attgccaacaggttgctggcagtcctctcgcgcgcgctcacaaagtacttgcagcacacg
gcgttcacgtgtcgtatggacgacctgatcctcacggacgagggcgagaagctccgcagg
gagatcctcgacgccgccaaggaggacggcgtgtacacggcgatgaagtacgtcggtctc
cccgagggctcgagccccgacgacccggccgcgcaggccaacctcaagatgcgcctcgag
ggcattctgcacgacgactcgcttatggcgggctacgacggcgtgatgcagcaaaagttc
aacaagacgacgtccaagatcaacaacgacgtgctccctgcccacctcatccggcccttc
cccgacaacaacatgcagaccatgacaatctcaggtgccaagggttccaaggtcaacgcg
tcgcagatctcgacgttgctcggtcagcaggcgctcgagggacgccgtgtaccgaccatg
gtgtcgggcaagacgctgccggcgttcaaggcctacgacacctcggcgcgtgcgggtggc
tacgtcgcgaaccgtttcttgacaggcgtccgcccgcaggagtactacttccactgcatg
gctggtcgcgagggtcttatcgacacggccgtcaagactgcgcgttcgggatatctccag
cgctgtctgattaagcacctcgagggcgtcaaggtgcactacgaccacacggtgcgcgac
tcggactcgtccgtccttcagttcctctatggcgacgacgcgatcgacgtgaccaagtca
agacacttgaccaagtttgactttgcggcgcggaaccacgactcactgcttaacaagtac
gacccgagcgcaattgccggcaaggtcgacgacagcgaggcgatcgactggagcaagaag
gcgctcaagaagcccgccaagtacgaacctgccatgagcatctaccagccgagccgttac
ctgggctccatgtccgaggcgtacgcacgcaacgtgaacgagtacattgcgtccaacaag
gccgggtacattcagccgcgcaagggcgagacgccgccatctgcttacgcctctgtgcgt
attcccgagcgcgagttcacgcagctggcaagagtgcgctacatgcgctcgctcgtcgac
ccaggagaggcggtcggcctgctggcgtctcagggtgtcggcgagccgtcgacgcagatg
acgctgaacaccttccacttggctggtcacggtgctgccaacgtcacgcttggtatcccc
cgtctgcgtgagatcgtcatgacggctgcacgcaagcctgccactccgacgatgacgctc
ccgttgcgcgagcacgtcgaggctggcgacgctgatacatttgtcaaactcgtgagccga
ctcacgctgtccgaggttgtggagaaggtcacggtcaccgagcggttgtccggcaagacc
gccgaggcgaacaactcgcgcgtgcgcaggtacactgttctgctggacttctaccctcca
gaggagtacacggatgagtacaagatcacggtggaccagctgcacgactcgttgtgcacg
tcgtttgcggaccgggtcaagcgccagatcgtcaaccagctgcgcacggccatcaaggcc
aaggagcaggaccaggccgtgggcaagggtctgcgtgtgcgtgctggtgcggacattgaa
gaggcgcccaggcggggaagagacgatgagctcgacgacgacgacgaggactctgggcag
ctcaagcgggcccgtcaggcgcgcgctctcgagtacgaggacgacgacgaggagacgggc
gtccaggacctcgaggacattatcgaggccgggcaagagagcgagtcggacgacgaggac
gaggaggatgacgctgctaccaaggccgcatgggacgcggcagccgacgtgcttgccgag
cagttcaagcgggcaagcaagtacgcgaccgacttccactttgactcgcggggcaagagc
gcgcagttcgagctccagttccccggccaggcgcccaagctcctcctcgtcgacctggtc
gagcaggcgtgtcgggaggcggtgatccacgagatcccgtccatcggccgctgcctgaag
aactttgacgacaagggtgtcttttctcgctcgctcacgaccgagggctcaaacatccgc
ggcatgtgggcgctggccgacgagctgatcgacctggacaagattggtagcaacgacgtc
tacgccatccaccagacgtacggtgtcgaggcagcccgccggacaattatcaacgagatg
acggccatcttcggtgtgtacggcatcgacgtcgactaccgccacctgaccgttattgcc
gactacatgacgcactctggcgggtacagcccgttcaaccgtacgggtatttcgcacaag
agctcgccactgctcaaggcgtcttttgagacgacggttgcgttcctctctgacgcgacg
ctacacggagactttgacgatctcacgtcgcccgcggcaaagattgtgctgggcaagccg
agcgggagtggaacgggcgcttttgatgtgcgtgcgcccacgcgcatgtag
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integrated database retrieval system
