Cutaneotrichosporon cavernicola: CcaHIS019_0309130
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Entry
CcaHIS019_0309130 CDS
T09540
Symbol
NOT5, CcaverHIS019_0309130
Name
(RefSeq) uncharacterized protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CcaHIS019_0309130 (NOT5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0309130 (NOT5)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CcaHIS019_0309130 (NOT5)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CcaHIS019_0309130 (NOT5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Poty_PP
MG280
Motif
Other DBs
NCBI-GeneID:
85494713
NCBI-ProteinID:
XP_060456108
UniProt:
A0AA48IJ36
LinkDB
All DBs
Position
3:complement(join(2450907..2450930,2450974..2451307,2451342..2451658,2451697..2452025,2452071..2452704,2452760..2452992,2453045..2453066))
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AA seq
630 aa
AA seq
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MALRKLQTEIDRTLKSVATGVETFESTFDKLNHASNATQKDKLETDLKTQIKKLQRMRDQ
IKVWLGSSDIKDKSALLDNRKLIETQMERFKALEKEMKMKAFSKEGLIAAARLDPAEKAR
RDMIDWIGTTTDELSRQIEATEAEQEQLQSAGRKKKQPSERLIELEQLNERRGWHIGRLE
IVQRMFENGQLTIDRLEDIQEDVKYFVEANTEEDFDFDLGIYDDLNLQDVEEEYNPADYG
HTAEDSSNIDTSSVADTLETPSKTPKEERKSKRLAAASTAAEDDTPPSPVTTKSRKKDKE
KKEKEFKAEPAAPEPPTPVQAPPAKPAPLPPIRYAAAAAAAVGAASHPPAHHTPEPPAVV
HKAESTVSVADDATPSETEAPTEETSTSASIAPSTAASAVDVSQSNGHPPSLPPGISATP
SPVSAEPPSNINGGVSQLSSLSQLPQADSSRTTTAANYAQSPRKDQTVLESLMQSFGVAK
EMADRRTTDPDELHNALDGSFRNAPAQVDAEPPRYYHPQNPVKTPSYYSQARLPLLEDKS
IYQRLELDQLFYIFYYMTGTYEQWLAAQELKRQSWRFHKQYLTWFQRAHNPQAITEDYEQ
GGYYYFDWENSWCQRRKSDFRFEYRWLSDH
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgaggaagctacagaccgagatcgatcgaacactcaagtctgtcgccaccggc
gtcgagacctttgagtccacctttgataagctcaaccatgcgtccaatgcgacccagaag
gacaagctcgagacagatctcaagacacagatcaagaagctccagcgcatgcgtgaccag
atcaaggtctggttgggcagtagcgatatcaaggacaagagcgcacttctcgataaccgc
aagctaatcgagacacaaatggaacgcttcaaagccttagaaaaagaaatgaagatgaaa
gccttctccaaagaaggtttgatcgcagccgcgcggttagacccagcagaaaaggccagg
cgcgacatgatcgattggatcggcactacaaccgacgagttgtctcgacagatcgaggcc
accgaggccgaacaagaacaactgcagtcggccgggcgcaagaagaagcaaccttcagaa
cgcctcatcgagcttgaacaactcaacgagcgacgcggttggcacatcgggcgactggag
attgtgcagcgcatgttcgagaacgggcaattgacaatcgacagactcgaggacatccag
gaggacgtcaagtactttgtcgaggccaacaccgaggaagactttgattttgacctcggc
atctacgatgacctcaacctgcaggacgttgaggaggagtacaaccccgccgattacgga
catacggccgaggactcttccaacatcgacaccagctctgtcgcggacacgctcgaaact
ccttccaagacgcccaaggaggagagaaagtccaaacgtcttgccgccgcatctacagct
gctgaagacgacactccaccaagtccggtgacgacaaaaagccggaaaaaggacaaagag
aagaaggagaaggagttcaaggccgagcccgccgcgcccgaacctccaacaccagtccaa
gcgccaccagccaaacctgcaccgctgccgcctatccgttatgccgctgccgctgccgcc
gctgttggggcagcatctcatcctccagcacaccacactcctgagcctcccgcagtcgtc
cacaaggctgagtccacggtgtccgtcgccgacgatgccacgccttccgagaccgaggca
ccaacagaggagacttcgacgtccgcatctatcgctccctcaacggcggcctctgctgtt
gacgtttcgcagtccaacggacatcctccatcgcttcccccaggcatttccgccaccccc
tcgcctgtgtctgcggagcctcctagcaacattaatggcggcgtctcgcagctgtcctca
ctgtcgcagctgccgcaggcggactcgtcgcgcaccaccaccgctgccaactacgcgcag
agcccgcgcaaggaccagactgttctcgagagtctcatgcagagcttcggcgtcgccaag
gagatggctgaccgccggaccactgatcccgatgagctccacaacgcgctcgacggctcc
ttccgtaacgcgcctgcccaggtcgacgctgaaccgccacggtactaccacccccagaac
cccgtgaagacgccgtcgtactactcccaggcgcgcctaccgctcctcgaggacaagagc
atctaccagcgtctcgagctggaccagctgttctacatcttctactacatgacagggaca
tacgagcagtggctcgcagcccaggagctcaagcgccagagctggcgcttccacaagcag
tacttgacatggttccagcgcgcacacaacccacaggccattaccgaggactacgagcag
ggtggatactactactttgactgggagaactcttggtgccagcgccgcaagagcgacttc
cggttcgagtaccgctggctttccgaccactga
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