Cutaneotrichosporon cavernicola: CcaHIS019_0309180
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Entry
CcaHIS019_0309180 CDS
T09540
Symbol
RPA135, CcaverHIS019_0309180
Name
(RefSeq) uncharacterized protein
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CcaHIS019_0309180 (RPA135)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccac03021
]
CcaHIS019_0309180 (RPA135)
Enzymes [BR:
ccac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CcaHIS019_0309180 (RPA135)
Transcription machinery [BR:
ccac03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
CcaHIS019_0309180 (RPA135)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
85494718
NCBI-ProteinID:
XP_060456113
UniProt:
A0AA48L2W0
LinkDB
All DBs
Position
3:complement(join(2463068..2463135,2463176..2466394,2466434..2466734))
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AA seq
1195 aa
AA seq
DB search
MVAAFDPLSPSKATSSKFPDKSTFGTLTRERQNRHPNVNGPDFQKLEELVRPHIESFDAL
TEGGDDGAAGLLQLGVQDLGEKVVFDGKPTDRMPFGNKITYRISQVAMSKPMVSDRDKLA
IERRIYPSEARERLTTYRSRLTVTIKWKVTTEEGTTREYDEIRECGLLPVMVKSQRCNLR
GASSAELVRRGEESSSWGGYFIVNGNEKLVRYLILPRRHFPINLERPSFAKRGVGYSRYG
CQIRCVRPDQSACTNTIHYLSSGGATLRFAWRKVEYMIPLVLILKALVDASDLEIFEGLV
QGESDNTFLTDRVELLLRGQKAWGLHTGTQCLEYLGDKFRVVMNCPEDWSNVQVGSFLLK
KVVLVHLPNPREKFRMLLFMLRKLYSMVAGSSCPDNPDSPQLHEVLLPGFLYSMIIKERF
EESLLGVRQQILQDIRMNRVKDFTSAKYFPSVLSKVNFDVGAKLSYFLATGNLVSPTGLD
LQQTSGFTIVAEKLNFYRYLSHFRCIHRGAFFAELKTTSVRKLLPESWGFLCPVHTPDGS
PCGLLNHLSHTCQIVTKTLDTTQIARLLSEHGMSQVFASNIDGKRYVTVQLDGRVIGWAT
PPVVAKLALMLRRLKTEGDARVPLDLEIGHVPVTSAGQYPGLYLFGSRSRMMRPVTYLPN
SKLDHVGTFEQVYMDIAITPEEIEKNVSTHVELDPTSMLSVVANMTPFSDFNQSPRNMYQ
CQMGKQSMGTPSTAHSRRTDNKMYRLQSGQTPIVRPKLWNDYGFDQFPNSTNAIVAVISY
TGYDMEDAMILNKSAHERGFGYGTVYKSDIFDLKDMARSRTAAPTLHFGFGRDVKDNSPW
RNFIDNDGLPIVGTQVKAGDPLAAYMDDISGKTKVHKYKGDETAYVETVRVLGSDLGDSE
LQKIQITLRIPRSPLIGDKFSSRHGQKGVCSQRFPMIDMPFSESGMQPDVIINPHAFPSR
MTIGMLVEFLAGKSGALHGMAQDGTPFKFSDDDRPVEYFGEQLLKAGYNYHGNEPMYSGI
TGEELRADIYIGVCAYQRLRHMVNDKFQARATGPVDSLTRQPVKGRKRAGGIRFGEMERD
ALIAHGTSFLLQDRLMNCSDYSTAWVCRSCGSLISLGFDDTVGPNDGRRAEYCRICERHE
QPGALDGAMQPSSVGIAAKAVGGNSKMDVVAVPYVFRYLCAEMACMGIRLNLTVV
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcggccttcgaccccctgtcgccttcaaaggcgacatcgtcaaagtttcccgac
aagtcgacgttcgggaccctcacccgcgagcgtcagaaccgacacccaaacgtcaatggg
cccgacttccagaagctcgaggagctcgtccgccctcacattgagagctttgacgcactc
accgagggcggtgacgacggagcggcgggactcctccagcttggtgtgcaggaccttggc
gagaaagtggtgtttgacggcaaaccgacggaccgaatgccctttggcaacaagatcacc
taccggatatcgcaggttgcgatgagcaagcccatggtatctgaccgcgacaagctcgcc
attgagcgtcgcatctacccttccgaagcacgtgagcgcctcaccacctaccgctcccgc
ctgactgtcaccatcaagtggaaggtgactaccgaggaggggaccacgcgcgagtacgac
gagattcgcgagtgcggcctgcttcccgtcatggtaaagtcgcagcgctgcaacctccgt
ggcgcatctagcgccgagctcgtgcggcgcggggaagagagctcgtcctggggcgggtac
tttatcgtcaacggtaacgaaaagctcgtccgctatctcatcctcccccgccgccacttc
cccatcaacctcgagcgtccgtcctttgccaagcgtggtgtcgggtactcgcgttacggt
tgccagatccgctgcgttcgtcccgaccagtcagcctgcaccaacacgatccactacctc
tcctcgggtggtgcgaccctgcgttttgcttggcgcaaggtcgagtacatgattcccctc
gtgctcattcttaaggcgctcgtcgacgcgagcgaccttgagatctttgagggcctcgtc
cagggcgagtccgacaacactttcctcacggaccgtgtcgagctcctcctccgtggccag
aaggcgtggggtttacacaccggcactcagtgcctcgagtacctcggtgacaagttccgt
gtcgtcatgaactgcccagaggactggagcaacgtccaggtcggcagcttcctgctcaag
aaggttgtgctcgtccacctcccgaacccccgcgagaagttccgcatgctcctcttcatg
ctccgcaagctctactcgatggtcgctggttcgtcttgcccggacaacccggactcgccg
cagctccacgaggtcctcctccctggtttcctctactcgatgatcatcaaagagcgcttt
gaggagtcgctcctcggcgtccgccagcagatcctccaggacatccggatgaaccgcgta
aaggactttacgagcgcaaagtacttccccagcgtgctctccaaggtcaactttgatgtg
ggcgcaaagctctcatacttcctcgccaccggtaacctcgtctcgccgactggcctcgac
cttcagcagacgagtggtttcaccattgtggccgagaagctcaacttttaccgctacctc
tcccacttccggtgtattcaccgtggtgcgttcttcgccgagctcaagacgacgtcggtc
cgcaagctcttgccagagtcgtggggcttcctgtgccccgtccacactccagacggttcg
ccttgtggcctgctcaaccacctttcgcacacgtgccagatcgtcaccaagacgcttgac
acgacccaaatcgctcgcctcctttccgagcacggcatgtcgcaggtctttgcgagcaac
attgacggcaagcgctacgttactgtgcagctcgacggccgtgtcatcggctgggccacg
ccacctgttgtcgccaagctggctctcatgctccgccgtctcaagacagagggcgacgcg
cgcgtgccgcttgacctcgaaatcggccatgtccctgtcacttcggccggccagtacccc
ggcttgtaccttttcggctcgcgctcgcgcatgatgcgccctgtcacgtacctgcccaac
agcaagctcgaccacgtcggcacgttcgagcaggtgtacatggacattgccatcacgccc
gaggagattgagaagaacgtcagcacgcatgtcgagctcgaccccacgtcgatgctctcc
gttgttgccaacatgacccccttctccgacttcaaccagtctccgcgtaacatgtaccag
tgccagatgggcaagcagtcgatgggtaccccgtccaccgcccactcgcgccgcacagac
aacaagatgtatcgtctgcagagcggccagacgcccattgtccgcccaaagctgtggaac
gactacggcttcgaccagttccccaactctacgaacgccatcgtcgcagtcatctcgtac
actggttacgacatggaggacgcgatgattctcaacaagtccgcgcacgagcgcggcttt
ggttacggcactgtgtacaagtcggacatctttgacctcaaggacatggcaaggtcacgc
accgctgcgccgacgctgcactttggcttcgggcgggacgtcaaggacaactcgccatgg
cgcaactttatcgacaacgatggccttccgattgtcgggacgcaggtcaaggcgggcgac
ccattggccgcgtacatggacgacatctcgggcaagaccaaggtccacaagtacaagggt
gacgagacggcgtacgtcgagactgtgcgcgtgcttgggtccgacctcggcgactcggag
ctgcagaagatccagatcacgctgcgcattccgcgttcccctcttatcggcgacaagttc
tcgtcgcgtcacggccagaagggtgtttgctcgcaaaggttccccatgatcgacatgcca
ttcagcgagagcgggatgcagcccgacgtcatcatcaacccgcacgcgttcccgtcgcgt
atgacaatcggaatgttggtcgagttcctggccggcaagagtggtgcgctgcacggcatg
gcacaggacggcactccattcaagttctcggacgacgacaggcccgtggagtactttggc
gagcagctcctcaaggcaggctacaattaccacggcaacgagccgatgtactcgggcatc
acgggcgaggagctccgcgccgacatctacatcggcgtgtgcgcgtaccagcgtctgcgt
cacatggtcaacgacaagttccaggcccgtgccacaggtcctgtcgacagcctcacccgt
cagcccgtcaagggtcgtaagcgcgccggtggtatccgtttcggtgagatggagcgtgat
gctctcatcgcgcacggtacatcgttcctcctccaggaccgcctgatgaactgctccgac
tactcgacagcatgggtgtgccgctcgtgcgggtctctcatctcgctcgggttcgacgac
acggtcggacccaacgacgggcgccgtgccgagtactgccggatctgtgagcggcacgag
cagcctggggccctcgacggcgcgatgcagccctcgagcgtcggcatagcggccaaggcc
gttggcggtaacagcaagatggacgtagttgcggtgccgtacgtcttccggtacctgtgt
gcggagatggcgtgtatgggcatccggctcaacttgacagtcgtatag
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