Cutaneotrichosporon cavernicola: CcaHIS019_0311750
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Entry
CcaHIS019_0311750 CDS
T09540
Symbol
RRP5, CcaverHIS019_0311750
Name
(RefSeq) uncharacterized protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
ccac
Cutaneotrichosporon cavernicola
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccac03009
]
CcaHIS019_0311750 (RRP5)
Ribosome biogenesis [BR:
ccac03009
]
Eukaryotic type
90S particles
Other 90S particles
CcaHIS019_0311750 (RRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Spt6_S1
Suf
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_15
RNase_II_C_S1
TPR_16
Motif
Other DBs
NCBI-GeneID:
85494975
NCBI-ProteinID:
XP_060456370
UniProt:
A0AA48L363
LinkDB
All DBs
Position
3:complement(join(3108018..3109118,3109164..3111697,3111731..3112592))
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AA seq
1498 aa
AA seq
DB search
MGPPKTSKKRAADSPAGNAKKARTDVPAPRAAPAFTSALQAEEVDFPRGGGTTLTPLEVK
QVRAEGRAEADAESGKPKPRKISERHAKRLKKVSGASDAARIERDKDTIRVEELSYKRLV
QGTLVLGRVHTVLPLHLVVSLPNNLLAHVPITEVSNTLTAALNKEMNAEDEDVEMDDEED
EGGAPELPEMFVPGQYVAAKVLNAFPTASQAFVAQYPVSETTRLAARIELTLIPEKINNE
VAKPDLTDGFRITGEVLSKEDKGYRVGLGLGEAAPGVEGFISNDEVEGELIPGQLLPSIV
KKATAGGRVLQLSTDPQTLIHSCLTEVSNIGSLLPGSLVSSLITAVVPSGLNVKICGFYD
GTIDLAHLSLGEDEIDSRFKIGKKLKARILYDTVAAGERRFALSVLPHIFNLSSPLTANK
VALEEAVPIGKTLASVKITRVIPDWGVVARTDDGVEGFCHISHLTDERLASLSHSTVQFK
AGTYHRARVIGHSPLDGVLLLSFEPRVLSQVFMDVGELQVGQVLKGTVKRLSDKGLFVNV
QGSVDGVVWPLHYADIRLKHPEKRFKPGTSVKARVWALEPARNRVVLTLKKSLVDSDLPA
PKTFEDVTAGEITPAVVSKLLDKGCIVDLFGGLRAFVPQSEAAQGFVANLADIFYVGKPV
TVRITNIDADAGKLVASVRQALPTAVAAEKLEVGAAVKGVVAQIHAEQVVVSLVPSQLTA
LLSLANLSNHRGMGVDELRRTLKTGEKLDDLVVVSKNEKSGLLIVANKREQKVPSGVSAA
ARSFDDLQVGDVVPGRVVGKTPAGAMLRIGKHIRGRVHPCDEADDLSNASGTGALRVDDN
VLCAILAVDTGARTVDLSTRKSRVNPDLKVKVADPEITSFGDLKDGQAVRGLVRSITPAG
LFVSLGRNITARVMIKELFDDFVKDWKPRFEINQLVSGKILTVTDDRAEMTLRTKPRKAE
KAGKLRISDFSEGQKVTATVKKVETYGLFLRIDGSDVSGLCHKSEIADNKKTDVAAALKG
FREGDAVRAVIVSVDKEKGRVNFSIKASHFADEFGEKEEEGEDEEDEAMDEDAEGGEDEE
DEDEDEDGDGSDKEDEDEEDADSDAELGLMDSDDDDVVRLEGDDEDAEDEEEIDTAPAGS
SMAQKKISTAGPMTVGGFDWAGKVDDADSDSDSESSSEVAAAAPKKKGKGKIDLTADAAS
ARPQSESEFERALLASPNSSYLWIQYMSFLLSLHEVDRARSLGRRALDRIAFREEGEKLN
VWMALVNLELGFGTPESADKVFREAVQFNDGRAVFTRYIDALIAAGKDASLIEATFNKML
KKYSAFPETWARFAEFYYTTNVDKARSLLPRALQSLAKSEHIDATKRFALLEYKSGSAER
GKTLFEGILDRHPRRLDVWNVYVDAAGRAGDMATVRALVDRALGSKMNAKRAKFVFKKWL
ALESRAGDKAGMDKAKARAREWVAENAKVESGSEESGSEKSGSEGESEDEDEDESDDE
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atgggaccaccaaaaacaagcaagaagcgggcagccgacagccccgccggcaacgccaag
aaggctcgtaccgatgtgccggcgccgcgcgccgctccggccttcacttcggcgttgcag
gcggaagaggtcgactttccgcgcgggggcgggacgactctgacgcccctcgaggtcaag
caggtgcgggcggaggggcgagccgaggccgacgccgagagcggtaagcccaagccccgc
aagatttcggaacgtcacgccaagcgcctcaagaaggtcagtggcgctagcgatgccgca
cgcatcgagcgcgacaaggataccatccgagtcgaggagctctcctacaagcgcctggtg
cagggcacgcttgttcttggacgcgtacacactgttcttcccctgcacctggtcgtgagc
ttgcccaacaacttgcttgcacatgttccgattaccgaggtttcgaacacgcttaccgcc
gcgctcaacaaggagatgaatgccgaggacgaggatgtcgagatggacgacgaggaggat
gagggcggcgcgcccgaactacccgagatgttcgtgccgggacagtatgttgctgccaag
gtgctcaacgctttcccgactgctagccaggcgtttgtcgcccagtaccccgtttccgag
acgactaggctcgcagcacgcattgagctcaccctcatccccgagaagatcaacaacgag
gtcgcaaagcccgacctcaccgatgggttccgcatcactggcgaggtcctcagcaaggag
gacaagggataccgtgtcggcctgggtcttggcgaagccgcaccgggcgtcgaaggcttc
atcagcaacgacgaggtggagggcgaactcattccgggacagctccttccctcgattgtg
aagaaggcgacggctggcgggcgcgttcttcagctcagcaccgacccgcagacgctgatc
cactcgtgcctcaccgaggtgtccaacatcggctcgctgctgcctggctcgctcgtgagc
tccctcatcacggccgtcgttccctcaggcctcaatgtcaagatctgtggattctacgac
gggaccatcgacctcgcccacctcagcctgggggaggacgagatcgacagccgcttcaaa
atcggcaagaagctcaaggcgcgtatcctgtacgacactgtcgctgccggcgagcggcgc
ttcgccctctcggtgctcccccacatcttcaacctctcgtcgccgctcactgccaacaaa
gtggcgctcgaggaggccgtgcccatcggcaagacgcttgcgagcgtcaagatcacgcgc
gtcatcccagattggggtgttgtcgcgcgcaccgacgacggcgtcgagggtttctgccac
atctctcacctcaccgacgagcgactcgcctctctgtcccacagcacagtccagttcaag
gccggcacgtaccaccgtgcgcgcgtgattgggcactctccgctcgacggcgtgctgctc
ctcagttttgagccgcgcgtcctctcacaggtgtttatggacgtcggcgagctccaggtc
ggccaggtgctcaagggcaccgtcaagcgactgagcgacaagggcttgtttgtgaatgtg
caggggagcgtcgacggcgtcgtctggcccctccactacgccgacatccgcctcaagcac
cccgagaagcgcttcaagcccggcacaagcgtcaaggcgcgcgtgtgggccctcgagccg
gcacgcaaccgcgtcgtcctgactctcaagaagagcctcgtcgattccgacctccccgca
cccaagacgtttgaggacgtcactgctggcgagatcacgcctgccgtcgtgtccaagctc
ctcgacaagggttgtatcgtcgacctgtttggcgggctgcgcgcgttcgtaccccagtcc
gaggcggcgcagggctttgttgccaacctcgccgacatcttctacgttggcaagcccgtc
accgtccgcatcaccaacatcgatgccgacgctggcaagctcgtcgcttcggtgcgccag
gcgctcccaaccgccgtggctgccgagaagctcgaggtcggggcggctgtcaagggtgtc
gtcgcccagatccacgccgagcaggtcgtcgtctcgctcgtcccgtcgcagctcactgcg
ctgctctcgctcgccaacctctccaaccacagaggcatgggtgtcgacgagctccgccgc
accctcaagactggggagaagcttgacgaccttgtcgtcgtctcgaagaacgagaagagc
ggtctcctgatcgtcgccaacaagcgcgagcagaaggtaccctctggcgtctcggccgcc
gcgcgctcctttgacgacctgcaggtcggcgatgtcgtgcccggccgcgtggtcggtaag
acgcccgccggcgcaatgctccgcatcggcaagcacatccgcggccgcgtgcacccatgc
gacgaggccgacgacctctccaacgcttccggtaccggtgccctccgcgttgacgacaac
gtgctgtgcgcgatcctggccgttgacaccggcgcgcgcaccgtcgacctgtcgacacgc
aagagccgcgtcaaccccgacttgaaggtcaaggtcgccgaccccgagatcacctccttc
ggtgacctgaaggacggccaggctgttcggggcctcgtgcgctccatcacccctgccggc
ctcttcgtcagcctgggacgtaacatcaccgcccgcgtcatgatcaaggagctctttgac
gatttcgtcaaggactggaaaccgcggttcgagatcaaccagcttgtttcgggcaagatt
ttgactgtgacagacgaccgggccgagatgaccctccgcaccaagcctcgcaaggctgag
aaggcgggcaagctccggatttccgactttagcgagggccagaaggtcaccgctaccgtt
aagaaggtcgagacgtatggcctcttcctgcggattgacgggtcggacgttagcgggttg
tgccacaagagcgaaattgcggataataagaagacggacgttgcggccgcgctcaagggg
ttccgcgaaggtgatgctgtgcgcgctgtcattgtttcagtcgacaaggagaagggacgc
gtcaactttagcatcaaggctagccactttgccgacgagtttggggagaaggaggaggag
ggggaggatgaggaggatgaggcgatggatgaggatgcggagggtggcgaggacgaggag
gacgaggacgaggacgaggacggggacggctccgacaaggaggacgaggacgaggaggat
gccgattccgacgccgagctcggcctcatggacagcgacgacgatgacgtcgtgcgcctc
gaaggcgacgatgaggacgccgaggacgaggaggagatcgacaccgcgcccgccggctct
tccatggcgcagaagaagatctccaccgccggacccatgactgtcggcggctttgactgg
gccggcaaagtcgacgacgcagactctgactctgactctgagtcgtcgtccgaggtcgcg
gccgccgcccccaagaagaagggcaagggcaagatcgacctgacggcggacgcggcgtct
gcccgcccccagtccgagtccgagtttgagcgtgctctccttgcatccccgaacagctcg
tacctctggatccagtacatgtcgttccttctctctctgcacgaggtcgaccgtgcccgt
tcgcttggccggcgcgcgctcgaccgcatcgccttccgcgaggagggcgagaagctcaac
gtgtggatggcgctcgtcaacctcgaactgggcttcggcacccccgagagcgcagacaag
gtcttccgcgaagcggtgcaattcaacgacggccgcgcagtcttcactcgctacattgac
gccttaatcgcggcgggcaaggacgcctctctaatcgaagcaacctttaacaagatgctc
aagaaatactcggcctttcccgagacgtgggcgcgcttcgccgagttctactacacgacc
aacgtggacaaggcgcgttccctcctcccgcgcgccctccagtctcttgccaagtctgaa
cacattgacgcgaccaagcgcttcgcattgctcgagtacaagtcgggctcggctgagcgc
ggcaagaccctgtttgagggtatcctcgaccgccacccgcgccgattggacgtgtggaac
gtgtacgtcgacgcagcgggccgggcgggggatatggccactgttcgggctctggtcgac
cgcgccttggggagtaagatgaacgcaaagagggcaaagttcgtcttcaagaagtggctg
gcgctcgagtctagggctggcgataaggctggtatggacaaggccaaggcgcgcgctagg
gagtgggtcgcggagaacgcaaaggtcgagtcggggagtgaggagagtgggagtgagaag
agtgggagtgagggggagagcgaggacgaggacgaggacgagagcgacgacgagtag
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