Cutaneotrichosporon cavernicola: CcaHIS019_0400270
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Entry
CcaHIS019_0400270 CDS
T09540
Symbol
CcaverHIS019_0400270
Name
(RefSeq) uncharacterized protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
ccac
Cutaneotrichosporon cavernicola
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccac03036
]
CcaHIS019_0400270 (CcaverHIS019_0400270)
Chromosome and associated proteins [BR:
ccac03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CcaHIS019_0400270 (CcaverHIS019_0400270)
microRNA pathway
RISC loading complex
CcaHIS019_0400270 (CcaverHIS019_0400270)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DSRM_2
Motif
Other DBs
NCBI-GeneID:
85495077
NCBI-ProteinID:
XP_060456472
LinkDB
All DBs
Position
4:complement(join(52626..53042,53076..53633,53673..55625))
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AA seq
975 aa
AA seq
DB search
MSKRPYTSNFTGSSQGSKKPRFSPPPFLPNPIIRLAPPPSLTVKNASEVLQRYSGWLRNR
PPDTVSHSNQEVNVGGYTHYIATVHLPTNCNVRQRNVRSDQPYPEPLLAKRNAVFHAVCE
LYHVHEIDDDLMPTPKTPSKPGPPPSVVKELTQNQPVVNLEISKHPPPTSRKSENRVPPS
HMPADTHNDRRESRSGTSSNNVSLREQPSKYVRPQEESRNVAREILGPKQPWVQHEILTT
SQLWFRNPPLGTKAYGAVISITFSKRPDIDGLCRRLCIITSRPLPFSKEIVLDLIEYNNS
NLRILPHARLGPSAPLNMTEQQLDHAFEWSRKFVRSLTNQKIDGLLEKAPYLFVPLRNEF
VKPTCTEDDVAWHELNLWDSFARDLNMRDFGQLGRSLEDAVLSPNQEFARRHYAVRVRSD
LTPNSPAPRKKDLSIHELTAGKNLRFPMPRLRYPNQPIIEAEHVNTAAKGGWAWTLNDIK
PLHHVIPELLALYFLPASIVRTGTFIPSIMTALDEHLVAAECNEEVFGGKLDHLHVLRAI
TAPAARPAPHNYERLEMLGDAVLHFVASVDVVRRAEPGEEGEADAGHELRSERHLIVSNR
TLATASEKAGVVKYLRNCVFRRRDYCPPGWIHEEHGSPPEDCAMFKEVGGKIPSDLVESL
LGAAYLSTGKSLQGALDAIHTLHIPVQLRSTCELQTASVVARLLSEPARAQNDSLTVLGY
EFKDPTKGRFILCIPPRAANFEQCSFLGNALLELLFVEQLWKHLHLSPHEMTQLKQKSVN
MVALGALAVSTNVVDQMRVVGESKKRLDTFVAEMRTAEGLASLQEHREYWTQSSEFKDLG
SVFQAVIGAIAEDCSYHLPTLRQMYTKFIGPWMERFGPPLPSSNPQSRFQSFMDCKGCRQ
WNTVGAHQDLPGRSATGDFGHALTADVTCHGHLIAHAEAPSMPEAVALASEKALHELLPR
IDTLCNCGSALARID
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggccatacacctcaaacttcacagggagcagccaaggttccaagaagcct
cgcttctcccctcctcccttcctcccaaaccccatcatcaggctggccccacctccaagc
ctcactgtcaagaacgcatcagaggtcttgcagcgctactctggttggctccgcaacaga
ccacctgacaccgtttcccactccaaccaggaggtcaacgtcggcgggtacactcactac
attgcgaccgtccaccttcccaccaactgcaatgtccgccaacgcaatgtgcgatcagat
cagccctacccagaacccctgttggccaagcgcaacgccgttttccacgcagtgtgtgaa
ttgtaccatgtccacgagatcgatgacgacctcatgcctacgcccaagacgccgtcgaaa
ccggggcctccccccagtgtagtcaaggagctcacccagaaccagcctgtcgtgaacctg
gagatttcaaagcacccacctcctacttctcgcaaatccgagaatcgcgtccctccgtca
cacatgccggcggacacgcataatgaccgccgagagtcgcgctccggcacgtccagcaac
aatgtgtctttgcgcgagcagccgtccaagtatgtccgaccccaagaggagtcgaggaac
gttgctcgcgagatccttgggcccaagcaaccgtgggtgcagcacgagattctaacgacg
tcgcagttgtggttccgcaaccccccactcggtaccaaggcatatggcgctgtcatctcg
atcacgttctccaagcgcccggacattgacggactgtgccgtcgactttgcattatcacc
tcgcgtcctctaccgttttcaaaagagattgtcctcgacctcatcgagtacaacaacagc
aacctgcgtattctcccgcatgcccgcttgggcccttcggcgcccctgaatatgactgag
cagcagctggaccatgctttcgaatggtcgcgcaaatttgtgcgctcgctcaccaaccag
aagattgatggccttctagagaaggcgccttatctcttcgttccccttcggaatgaattt
gtcaagccgacttgcaccgaggacgatgtggcatggcacgaactcaatctttgggattcg
tttgcacgcgacctgaacatgcgcgatttcggccaactgggacggtcgcttgaggacgcg
gtgctgtctcctaaccaagagttcgctcgaaggcactatgccgtgcgtgtccgttcagac
ctgaccccaaactcccccgcaccccggaagaaggacctgtccatccacgagttgactgct
ggcaagaatttgcgttttccaatgccacgtcttcgctaccccaaccagcccatcattgag
gccgaacacgtcaacaccgcggccaagggcgggtgggcctggacgttgaatgacatcaaa
ccactgcaccacgtcattcctgaactgctggccctctacttcctacctgcatccattgtg
cgtacgggtactttcatcccaagcataatgacggccctcgatgagcacctcgttgctgct
gaatgcaacgaggaggtgttcgggggcaagcttgatcacctacacgtcctgcgcgctatc
actgctcctgctgcgcgtcccgctccccacaattacgagcgacttgaaatgctcggcgac
gctgttctgcactttgttgccagtgtggacgtggtccgtcgagccgagccgggggaggag
ggtgaagcggacgccggtcacgagctccgctccgagcgccacctcatcgtatccaaccgc
actcttgcaacggcgtctgagaaggcaggtgtagtcaagtacctgcgaaactgcgtgttc
aggcggcgcgattactgccctccggggtggatccatgaggagcatggttcgcctcctgag
gactgtgccatgttcaaggaggtaggaggcaagatcccgtcggacctcgtcgagtcgctc
cttggggcagcttacctctcgaccggtaaaagcctccaaggggccctggatgccatccat
acactgcatattccagtccagctgcgctcgacgtgcgagctgcagactgcatcggtggtg
gcgcgcttgctttctgagccggctcgtgcccagaatgactctttgactgtcctcggctac
gagttcaaggacccaacaaaggggcgctttattctctgtattccaccgagggccgccaac
tttgagcaatgctcgttcctcggtaatgcccttttggaactgctgttcgtggagcagttg
tggaagcatctgcacctgagtcctcatgagatgactcaactcaagcaaaagagcgtgaac
atggtggcgctgggcgcactcgctgtctccacaaacgtcgttgaccaaatgagggttgtg
ggcgagtccaagaagcgcctggacacgttcgttgctgagatgcgcacggccgaaggcctt
gctagccttcaagagcatcgcgagtactggacgcagtcgtccgaattcaaggacctggga
tctgtgtttcaggcggtcatcggcgccatcgccgaggattgcagttaccatctcccaacg
ctgcgccaaatgtacacaaagttcattgggccttggatggagagattcggcccgccgcta
cccagcagcaatccccagtcgcggtttcagtcattcatggactgcaagggatgccgacag
tggaacactgttggcgcccatcaggacctgccgggacgaagcgccacaggtgatttcggc
cacgcgttgacagcagatgtcacgtgtcacggccatctgattgcgcatgccgaggcacct
tcgatgcccgaagccgttgcgctggcgagtgagaaggcgctgcacgagctgctgccgcgc
atcgacacgttgtgcaattgtggcagcgctcttgcgcgtattgattga
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