KEGG   Cutaneotrichosporon cavernicola: CcaHIS019_0401670
Entry
CcaHIS019_0401670 CDS       T09540                                 
Symbol
CcaverHIS019_0401670
Name
(RefSeq) uncharacterized protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
ccac  Cutaneotrichosporon cavernicola
Pathway
ccac03040  Spliceosome
ccac04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ccac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CcaHIS019_0401670 (CcaverHIS019_0401670)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    CcaHIS019_0401670 (CcaverHIS019_0401670)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccac03041]
    CcaHIS019_0401670 (CcaverHIS019_0401670)
   04121 Ubiquitin system [BR:ccac04121]
    CcaHIS019_0401670 (CcaverHIS019_0401670)
   03400 DNA repair and recombination proteins [BR:ccac03400]
    CcaHIS019_0401670 (CcaverHIS019_0401670)
Enzymes [BR:ccac01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     CcaHIS019_0401670 (CcaverHIS019_0401670)
Spliceosome [BR:ccac03041]
 Complex B
  Other components
   Prp19 complex
    CcaHIS019_0401670 (CcaverHIS019_0401670)
 Complex C
   Prp19-CDC5 complex
    CcaHIS019_0401670 (CcaverHIS019_0401670)
Ubiquitin system [BR:ccac04121]
 Ubiquitin ligases (E3)
  U-box type E3
   CcaHIS019_0401670 (CcaverHIS019_0401670)
DNA repair and recombination proteins [BR:ccac03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    CcaHIS019_0401670 (CcaverHIS019_0401670)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_DCAF4 U-box Beta-prop_WDR41 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_At4g14310 WD40_RFWD3 zf-Nse WD40_like Beta-prop_NUP159_NUP214 DUF1631
Other DBs
NCBI-GeneID: 85495217
NCBI-ProteinID: XP_060456612
UniProt: A0AA48L3M5
LinkDB
Position
4:join(379473..379488,379538..379621,379662..379730,379782..379998,380034..380162,380195..381194)
AA seq 504 aa
MFFCAISGSPPTNPVVSKTSGTVYEKALIERYIEENGTDPISGEALTMEDLVEVKAKPST
LPPRAATQTSIPALLTALQGEYDSIMLESLEIKKAFQAQRAELANALYREDAATRVIARL
MAERDEARSALQSIQATVGVAAGGAEDVEMEAETSGPLPPSVEEKIMETNASLSAVRKKR
KLAPGYANAEAVQGYTQTKSIGSMHGTKPPGVTALDLAADGKTVVTGGNDKVVQVYDLES
DKVLGTLKGHTKAVTHVAFREKEGEALLAVSSGADKTVRFWGEKDGKWSAHGSIAAHKGD
VTGLAVHPCGLYVSSASTDSTWMLHDIDTAKTIATYGAPEGVEGSFAYTSFATHPDGVLA
AGGTKDGIVRVWDARQNSGPQAKLDSHPGKALSSVAFSENGYYLATGSAADNTVNVFDLR
KLKLFSSWQLPTENVVTEVRFDPSAQFLSVAGTDLRVYANKSWNELLKFDDNNANLTAAR
FGKLGSEIVLAGLDRTVRILGAAA
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgttcttctgtgccatctccggatctccgcctacgaaccctgtcgtctccaagacgtcg
ggcaccgtctacgagaaggcgctgatcgagcggtacattgaggagaatggcactgacccg
atctcgggagaggcgctgacgatggaggatcttgtggaggtcaaggccaagccgtccact
ctccctcctcgcgctgcgacgcagacgtcgatccctgcgctcctcactgccctccaagga
gaatatgactcgattatgctcgagtcgctcgagatcaagaaggctttccaggcgcagcgc
gcagagctcgcaaatgcgctgtaccgcgaggacgcggcaacgcgcgtgattgcgcggttg
atggctgagcgcgatgaggcacggagcgcgctgcaatccatccaggcgacggtcggggtc
gccgctggtggggcggaggatgtggagatggaggctgagacctcggggccgcttcctcca
tccgtggaggagaagattatggagacgaacgcatccctctcggcagtacgcaagaagcgc
aagctggcgcctggatatgccaacgccgaggccgtccaggggtacacgcagaccaagtcg
atcgggtcgatgcacggcaccaagccgccaggagtgactgcattggaccttgcagcggac
gggaagacggtcgttactggcggcaacgacaaggttgtccaagtgtacgacctggagagc
gacaaggtgctcggcacgctcaagggccacaccaaggcggtgactcacgttgcgttccgc
gagaaggagggagaggcgctgttggccgtgtcgagcggtgcggacaagaccgtgcggttc
tggggcgagaaggacgggaagtggagtgcacacggcagcatcgctgcgcacaagggcgac
gtcacaggcctggctgtgcacccctgcgggttgtacgtctcgtctgcgtctacggacagc
acctggatgctgcacgacattgacacggccaagactatcgcgacgtacggtgctcccgag
ggtgtggagggcagctttgcatacacgtccttcgcgacacaccccgacggcgtgctcgcc
gcgggcggcaccaaggacggcatcgtgcgtgtgtgggatgcgcggcagaactcgggacct
caggccaagctcgactcgcacccaggaaaggcgctgtcgagcgtcgccttctccgaaaac
ggctactacctcgcgacgggctcggcagcagacaacaccgtcaacgtgttcgacctgcgc
aagctcaagctcttctcgagctggcagctcccgactgaaaacgtcgtcacagaggtccgc
ttcgacccttcggcccagttcctctcggttgcgggcactgacctgcgcgtctatgccaac
aagtcgtggaacgagctcctcaagtttgacgacaacaacgccaacctcacagctgcacgc
tttggcaagctcggcagcgagatcgtacttgccggcctcgaccgcacggtgcgcatcctt
ggggccgccgcctag

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