| Entry |
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| Symbol |
MSD1, CcaverHIS019_0403320
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| Name |
(RefSeq) uncharacterized protein
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| KO |
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| Organism |
ccac Cutaneotrichosporon cavernicola
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ccac00001]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CcaHIS019_0403320 (MSD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:ccac01007]
CcaHIS019_0403320 (MSD1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:ccac03016]
CcaHIS019_0403320 (MSD1)
03029 Mitochondrial biogenesis [BR:ccac03029]
CcaHIS019_0403320 (MSD1)
Enzymes [BR:ccac01000]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
CcaHIS019_0403320 (MSD1)
Amino acid related enzymes [BR:ccac01007]
Aminoacyl-tRNA synthetase
Class II (A)
CcaHIS019_0403320 (MSD1)
Transfer RNA biogenesis [BR:ccac03016]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CcaHIS019_0403320 (MSD1)
Prokaryotic type
Other AARSs
CcaHIS019_0403320 (MSD1)
Mitochondrial biogenesis [BR:ccac03029]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CcaHIS019_0403320 (MSD1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4:complement(join(827540..827821,827869..828702,828764..828822,828865..828938,829329..829400,830071..830728,830761..830977,831040..832281))
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| AA seq |
1145 aa
MLARAVARRALCASPILRTARTARPLVRLNSTAPSTGKIAPLAIPPDALRAHSGPRERVT
HDPADLSPQVAGTDVVLAGWLHASRRANKNVSFFNLRTQRGMVQLVARGDLATEMLEWPL
ESVLQVSGTVVARSAKALPPNVEQASDAVEVDVSSATLLNPAGELPFLPNRPPLANEDLR
AEYRFLDLRRNALAKNLRLRSDVAHLTRNYLHNKGFTEVETPMLVNSSPEGAREFLVPTR
GKEPSFYALPQSPQQAKQLLVAGGAVDRYYQIARCFRDEDGRKDRQPEFTQIDLEMAFVE
GAGEGTWGIGGGEVREVVEGLMRLVWNKIKGYEIPADGFKVMPYDVAMDVYGSDKPDTRF
EMYTLPVGYYPTMSDESLDKILMDQSPSTVEWMVTPKTWAESVDVAKVGNDNPYVDYVRI
TPENQYSWTKDSVLTLPMGLTLDSSLPGGAQPGDVVWVSRRPKIPEGGWTPLGRLRVQLY
DELVMKGTVKPPTEPHFLWVTQFPLFTKADEDKAFLAKGRWASSHHPFTSPVAGDLPSLE
SGDVERVRGQHYDLVLNGSEVGGGSVRIHDPELQKYVMKEVLKLDEEEMGRFAHLLRALE
CGAPPHGGIAIGFDRLIALLADTPSIRDVIAFPKTGTGADPVFRSPSASSDDVLGEYGLR
SIKEKEGDKDKVQEDNGRWNMAEESDDPVVKRLGELPSRFLDEHKFPGLQRQDRVLPNSS
FEERHTVLPYHASSCSTLFFAFAIPTLRYREYARQQLPNMATVNIRRDVDDKFYRYKMPV
LLTKIEGRGNGIKTVVPNMEDVARALNRPPSYPTKFFGTELGAQTTMANDRYIVNGAHQA
DRLRELLDAFIDKFVLCASCKNPETELVITGRGNNEDIHRDCKACGAHTGIDMRHRLTTF
ILKNPPKKDKKKGKKGMTAEANVGGPVVFDEKEGSNEDDSANGTPPVPTEGTDIDAMLGR
GGDPILVNPDALAKKVKNLEIDEDEEDEDSPFYQLRVWLSENPAPSDAEVVAKLKELDIV
TKHKALVEIGHKLFTSENVAQEIEERASLLNALITSEKHQKSFLGGLERLVALDPNADEL
IANGVVSRMLMAAYQDDVLDEEVCINFGTHVSKKYVSKEQSKKVRKAADSFLKWLEEADS
DSDDE |
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| NT seq |
3438 nt +upstreamnt +downstreamnt
atgctggcccgcgccgttgcacgtcgcgcactgtgcgcaagccctattctgcggacagcg
cgaacagcccgcccgctcgtgcgcttgaactcgacagctccgtccactgggaagatcgcg
cccctcgctatccctccagatgcgctgcgtgcgcactctggtccgcgggagcgggttacc
cacgatccggccgacctcagtccgcaggttgcgggcaccgacgtcgtgctcgcgggttgg
ttacatgcgtcgcgacgcgcgaataagaacgtctcgttcttcaacctccgcactcagcgg
ggtatggtgcagctcgtcgcgcgtggtgacctggccacagagatgctggagtggccgctg
gagagtgtactccaagttagcgggacagttgtcgctcgctccgccaaggctctccctccc
aatgtggagcaagcctccgacgcggtcgaggtggacgtgagcagcgcgacactgctcaac
cccgcgggcgagctgccgttccttcccaaccgaccgccactggccaacgaggacctgcgc
gccgagtaccgtttcctcgacctgcggaggaatgcgttggccaagaacctacgcttgcgt
tccgacgtcgcccacctcaccaggaactacctgcacaacaaggggtttaccgaggtcgag
acgccgatgctcgtcaactcgtcgcctgaaggggccagggagtttttggttcccacccgc
ggtaaggaacccagcttctatgcactgccccagagcccgcagcaggctaaacagcttctc
gtcgctggcggcgctgttgaccggtattaccagatcgcgaggtgtttccgggacgaggac
gggcgcaaggaccggcagcccgagtttacgcagatcgatctcgagatggcgtttgttgag
ggcgcgggggagggtacctggggcattggtggaggggaggtgcgcgaggttgttgaaggc
ctgatgcggctggtctggaacaagatcaagggatatgagatcccggccgacggattcaag
gtcatgccgtacgacgttgctatggacgtgtacggcagcgacaagcccgacactcgcttc
gagatgtacaccctgccggtgggctactatcctacgatgagcgatgagtcgctcgacaag
atcctcatggaccagagccccagtaccgttgagtggatggttaccccgaagacgtgggct
gagtcggtcgacgtcgccaaggtcggcaacgataatccctatgtcgactacgtccgcatc
acgcccgagaaccagtacagctggaccaaggactcggtgcttacccttcccatgggcctc
acgctggactcgagtctgccgggcggtgcgcagccaggcgacgtggtttgggtctcgcgc
cgccccaagatccccgagggcggctggactcccctgggccgtctccgtgtgcagctgtac
gacgagctggtcatgaagggcactgtcaagcctccgaccgagcctcacttcctgtgggtc
acacagttcccgctcttcacaaaggcggacgaggacaaggccttcctcgccaagggacgc
tgggcgtcgtctcatcaccccttcacctcacccgtggctggagacctgccatccctggaa
tccggtgacgtcgagcgtgtccggggtcaacactacgaccttgttctgaacggttcagag
gtcggtggcggcagtgtgcggatccacgatcccgagctgcaaaagtacgtgatgaaggag
gtactcaagctggatgaggaggagatgggtcgctttgcccacctcctccgcgccctcgag
tgtggcgctcccccacatggtggcatcgctattgggtttgaccgcttgattgcgttgctg
gccgacacccctagcattcgggacgtcatcgcgttcccgaagactgggacgggcgccgac
cctgtattccgctccccgagtgcttcgagtgacgacgtgctcggcgagtatgggctgcgg
tccatcaaggagaaggagggagacaaggacaaggtccaggaggataatgggcggtggaac
atggcggaggagagcgacgaccccgtcgtcaagcgccttggagagctgccgtcgcgcttc
ctcgacgagcacaagttccccgggctccaacgtcaagatcgcgtccttcccaattcttcc
ttcgaggaacggcacaccgtgctaccataccacgcgagttcatgcagcaccctgtttttc
gcgtttgcaatccctacacttcgataccgcgagtacgctagacaacaactgcccaatatg
gctactgttaacattcgccgcgatgtggacgacaagttctatcgctacaagatgcccgtc
ctcctcaccaagatcgagggccgtggtaacggcatcaagacggtcgtgcccaacatggag
gacgtcgcgcgtgcgctgaatcggccgccttcgtaccccaccaagttctttggcaccgag
ctcggtgcacagaccaccatggccaacgaccgttacattgtcaacggcgcgcaccaggca
gaccgcctgcgcgagttgctcgatgctttcattgacaagtttgttctctgcgcgtcgtgc
aagaaccccgagaccgagctcgtcattacgggccgcggcaacaacgaggacattcaccgc
gactgcaaggcttgcggtgcgcacacgggcatcgacatgcgccataggctcacgaccttc
atcctcaagaaccctcccaagaaggacaagaagaagggcaagaagggcatgactgccgag
gccaacgtcggcggccctgtcgtctttgacgagaaggagggcagcaacgaggacgacagc
gcgaatggcacccccccggtcccgaccgagggcaccgacattgacgccatgctcggtcgc
ggtggcgacccgattctcgtcaacccggacgcccttgcgaagaaggtcaagaacctcgag
atcgacgaggacgaagaggacgaggactctccgttctaccagcttcgcgtctggctgtcg
gagaaccctgctccgtctgacgccgaagtcgttgccaagctcaaggagctcgacattgtc
accaagcacaaggcgctcgttgagattggccacaagctcttcacatccgagaacgtcgcc
caggagatcgaggagcgtgccagcctcctcaacgctctcatcacttcggagaagcaccag
aagtcgttcctcggcggcctcgagcgcctcgttgcgcttgaccctaacgccgacgagctg
attgccaacggcgtcgtctcgagaatgctcatggctgcttaccaggatgacgtgcttgac
gaggaggtgtgcatcaactttggcacgcacgtcagtaagaagtacgtcagcaaggagcag
agcaagaaggtgcgcaaggctgccgattcgttcctcaagtggcttgaggaggccgacagc
gacagcgacgacgagtga |
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