Cutaneotrichosporon cavernicola: CcaHIS019_0403460
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Entry
CcaHIS019_0403460 CDS
T09540
Symbol
SSN6, CcaverHIS019_0403460
Name
(RefSeq) uncharacterized protein
KO
K06665
general transcriptional corepressor CYC8
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac04011
MAPK signaling pathway - yeast
ccac04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
CcaHIS019_0403460 (SSN6)
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
CcaHIS019_0403460 (SSN6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccac03021
]
CcaHIS019_0403460 (SSN6)
Transcription machinery [BR:
ccac03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
CcaHIS019_0403460 (SSN6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_CcmH_CycH
TPR_17
TPR_8
TPR_16
TPR_14
CFAP70_TPR_C
TPR_19
TPR_12
TPR_7
TPR_11
TPR_9
CFAP70_mid_TPR
ARM_TT21_C
TPR_Slam
ANAPC3
PRP6_TPR
RMD1-3
TPR_YpiA_C
ARM_TT21_N
ARM_TT21_5th
HIR3_bundle
HAT_Syf1_CNRKL1_N
PPTA
Suf
HAT_PRP39_N
TPR-S
TPR_15
ARM_TT21_4th
BTAD
TPR_MalT
TPR_21
IFT56
Iml2-TPR_39
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
85495396
NCBI-ProteinID:
XP_060456791
UniProt:
A0AA48L3Z2
LinkDB
All DBs
Position
4:complement(join(873200..873945,873980..875752,875787..875969,876006..876209,876255..876621))
Genome browser
AA seq
1090 aa
AA seq
DB search
MPAGHHMPVHSSYPPPGPGYPNHPSHPMNHPHHHSSRPNGPPPGMPGGGPPMSVPGPPPN
MAMSVAPPEPIGPPTNGPVSNGHHGTPAPSMPMSAALRQGKEAMESMIAQLKSANENTWM
LIGAVSEQISNQDDAASAFDRALKHNPNSVLALNAAATLARSRDKFDEAVDLFQRILNIK
QDNGEVWGSMGHCLLMKDDLPKAYTAYQQALHYLPNPKEPKLWYGIGILYDRYGSFEHAE
EAFSSVLKMDPDFEKANEIFFRLGIIYKHQRKYPNSLDCFRRIISNPPRPLTSWDIWFQL
GHVYELDRDYVQARDAYMRVLGHQPDHAKVLQQLGWLYHQPGAPFANHEQAIDYLTKSLE
TDPHDAQSWYLLGRAFMASQRYNKAYEAYQQAVYRDGRNPTFWCSIGVLYFQINQYRDAL
DAYSRAIRLNPYISEVWFNLGSLYESCNNQISDAIDAYVRAQELEPQNAAIKQRLQLLQS
HMNTPLPPPPAPVDVHPSQYSGATPSAGYAPNGSQPGSPPPGHGPAPGPQVGLDAREQPP
PPGSGRELPSLPTDYRGPEPSSFRGGAIPPPLAHVDESRGNMSRHAPLAPIDIDRQQEPP
REMRESYRDGPNFAGGAPGPNRFDPTTDGRGGSPRRRQAEPGAPYPPGYPPQQHPGYRDR
EREDWERRGGDPRAVPAHDPRGPSPRPGLHPADPRAGPPRDPRDPRDPREFARSPEGYPP
YGGPQYERGGPYPPGYPGPRDLRARERFEEPESKPPIDFSNGRQASLAREHGDMRAPSPA
ASTSSKASARRKVSDKREDPTRKMKKAPDSKGRRLNGEEPSPRPSPAPSSVRASAPNRAI
DEDYDEGVDALMTLANDRRAPSVATDKAPSPVIGTKRPDPPSPDMHSNKKSKASPPVGSP
TRQTVIEVLNAPRPPPPPTVERAESNASIEVLNAPRVQSNTDFMKLGRDKDRRSPERPAA
RQQPSAPTSPWERERRERGEREQRVQREEEKKDETKSPKSPVKRSQSDDRAMPRSPSIVR
SPTAEKAPSSKTSVVGAKALSSKGSVSGDKPPSSKGSPMDVAMDKEEKVPSKPTSAFGDD
GDVEMEDAEK
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgggcaccacatgcccgtgcactcgtcatatcctccgcctgggccaggctac
ccaaaccacccttctcaccccatgaaccacccacaccaccactcgtcacgccccaatggc
cctcctcccggcatgcctggaggcggccctccaatgtccgtgccgggccctcctcccaac
atggccatgagtgtagcgccaccggagcccattggccctccaaccaacggtcccgtgtcc
aacggtcaccacggcactccggcgcccagcatgcccatgagcgcagctctgcgacaaggc
aaggaggctatggagagcatgattgcgcagctcaagagtgctaacgagaacacctggatg
ctgattggcgctgttagcgagcaaatatcgaaccaggatgacgccgcaagcgcgttcgac
cgcgcgctcaagcacaaccccaactcggtcctcgctctcaacgcagcagccacattggcg
cgcagccgagacaagtttgacgaggcggtcgatcttttccagcgcatcttgaacatcaaa
caggacaacggcgaggtgtggggctcgatgggacattgcttgttgatgaaggatgacctt
cccaaggcctacactgcctaccagcaagcgctccactacttgcccaaccccaaggagccc
aaactatggtacggcatcggcatcttgtacgaccgatacgggtcgtttgagcacgccgaa
gaagcgttctcgagcgtcctcaaaatggaccctgacttcgagaaagcgaacgagatcttc
ttccgcctcggtatcatatacaagcaccagcgcaagtaccccaactcgctcgactgcttc
cgccgcatcatttcaaatccacctcgtccattgacgtcctgggacatatggttccaactc
ggccatgtctacgagctcgaccgtgactatgtccaggcacgagacgcctacatgcgcgtg
cttgggcatcagcccgatcacgcaaaggtgctacagcagctaggttggctttaccaccag
ccgggcgcgccgtttgccaaccacgagcaggccattgactatctgacaaagtcgttggag
acggaccctcacgacgcacagagctggtacctcttaggccgcgcgttcatggccagccag
cgctacaacaaggcatacgaggcgtaccagcaggcggtgtaccgcgacggccgcaatcca
acattctggtgttcaatcggtgtcctatatttccagatcaaccagtaccgtgacgcccta
gacgcatactctcgcgccattcgcttgaacccatacatctccgaagtctggttcaaccta
ggaagcctatacgagtcgtgcaacaaccagatcagcgacgccatcgatgcctacgtgaga
gcgcaagagctagagccgcagaacgctgcgatcaagcagcgtctccagctcctacagagc
cacatgaacacgcctctcccacctccgcctgcgcccgtcgacgtccacccgtcgcagtac
agcggagcgactccgagcgcgggttacgcgcccaatggcagccagcctggctctccgcca
ccaggccacggacctgctccaggtcctcaggttggcctagacgctcgcgagcaaccgcct
ccgccaggatctgggcgcgaactcccttcactcccaaccgactatcgtggccccgagccg
tcgtcgttccgtggtggcgctatcccaccaccgctcgcccacgtcgacgagtcgcgcgga
aacatgtcccgacacgcccccttggcgcctatcgacatagaccgccagcaggagccgccc
cgtgagatgcgcgaaagttaccgtgacggccccaactttgctggtggcgcacctgggcct
aaccgctttgacccaaccactgacggtcgtgggggatcgccgcgacgacgccaggcggag
cctggtgccccgtacccaccgggataccctcctcagcagcacccggggtatcgcgaccgt
gagcgcgaggactgggaacgtcgcggtggtgaccctcgcgccgtaccggcccacgacccc
cgcggaccatcgccgaggcccggcctgcatccggctgacccacgggcagggccacctcgc
gaccctcgcgacccacgagacccgcgcgagtttgctcgctcacccgaagggtaccctcct
tacggcggcccgcagtacgagcgtggtgggccgtacccacctggctacccgggcccccgg
gatctgcgcgcgcgagagaggtttgaggagcctgagagcaagccgcccatcgactttagc
aacggccgccaggcgtccttggcgcgcgagcacggtgatatgcgcgccccgtctccggcg
gcgtctaccagcagcaaagccagcgcgcgccgcaaagtgtcggacaagcgcgaggaccct
acccgcaagatgaagaaagcgcctgactcgaagggccgtcgcctgaacggcgaggagcca
agtccgcggcccagccccgcgccatcgagtgtgcgcgcgtctgcgcccaaccgcgctatt
gacgaggattatgacgaaggtgttgatgctctaatgactctggccaacgaccgtcgcgcg
ccttcggtcgcaacggacaaggcgccgagcccggtaattggcaccaaacgcccggatccg
ccctcgcctgacatgcacagcaacaagaagtccaaggcatcgccaccggtcggcagcccg
acgcgccagaccgtcatcgaggtactgaacgcgccgcgaccaccgccgccgcccaccgtc
gagcgcgccgagtcgaacgcgagcatcgaggtgctgaatgcgccgcgcgtccagtcgaac
acggacttcatgaaacttgggcgcgacaaggaccgtcggtcgccagagcgccccgcagct
cgtcagcagccgtcggcgccgacctctccttgggagcgcgaacgccgcgagcgcggtgag
cgtgaacagagagttcagcgcgaagaggagaagaaggacgagaccaagtcgccaaagtcg
ccagtgaagcggagccagtcggacgaccgtgccatgccgcgctcaccgtcgatcgttcgc
tcgcctacagcggagaaggctccgtcgagcaagaccagtgttgtcggtgccaaggctctg
tcgagcaagggcagcgtgtctggtgacaagcctccttcgagcaagggtagcccgatggac
gtggcgatggacaaggaggagaaggtaccatccaagcccacctctgcttttggggacgac
ggggacgtagagatggaggacgcggagaagtag
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