Cutaneotrichosporon cavernicola: CcaHIS019_0404170
Help
Entry
CcaHIS019_0404170 CDS
T09540
Symbol
POB3, CcaverHIS019_0404170
Name
(RefSeq) uncharacterized protein
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ccac
Cutaneotrichosporon cavernicola
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccac03000
]
CcaHIS019_0404170 (POB3)
03036 Chromosome and associated proteins [BR:
ccac03036
]
CcaHIS019_0404170 (POB3)
Transcription factors [BR:
ccac03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
CcaHIS019_0404170 (POB3)
Chromosome and associated proteins [BR:
ccac03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
CcaHIS019_0404170 (POB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
POB3_N
Rttp106-like_middle
Motif
Other DBs
NCBI-GeneID:
85495467
NCBI-ProteinID:
XP_060456862
UniProt:
A0AA48L448
LinkDB
All DBs
Position
4:join(1078024..1078048,1078091..1078120,1078174..1078279,1078323..1078404,1078439..1078544,1078586..1079324,1079362..1079819,1079861..1080063)
Genome browser
AA seq
582 aa
AA seq
DB search
MSNVTFDNIFMGESSDLGKLRFNSAGFGWKSLKNESNTPTTFNGSDVRGAQWLRVARQFQ
LRLSMRTPDRSRVTFDGFRRDDFEKVKRTLNEYFGVTVDHRDVALKGWNWGKATVQNQDI
VFEVQHKPAFELPLGQVANSNIAGKNEVAIEFAPTAASDGASNNARLPDELVEVRFYVPG
KSKKAKGSDAGSDGEETEKDEEGNDISAAEAFHTLIKDKADLGAATGDSIVVFEDVLVLT
PRGRFSIEFFPESLRLLGKSTDYRVPFTSINRIFLLPKLDDMHVQLVLGLDPAIRQGATR
YPFLVAQWPKDEEVDAELNLDDDEIAKYPDLQKNYHAPTFQVISRVLKSLTGKKVTPPGS
FRNAQGVNGIKANVKAVQGELYFLERGLIFIAKQPILIDFSKTESIAFSRVGGGIASART
FDMRVLASDGPDHVFSAISKEEAGPISQFLSSKNVRLKNEMDELEATDKMDMDDLSDDDD
DVSIMSEDEGRKKKKKKPQQQQAPVRRPVDEEDESEDEDFMDEDSSDGGSVSDSDSEASG
MESDASDPLMDELRKRSEARAKKKAAGEADGAPKKKKAKRDD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgtcacatttgacaacatctttatgggcgagtcgtccgatttgggcaagctc
cgcttcaactcggccggcttcgggtggaagtcgctcaagaacgagtcgaacacgccaacc
accttcaacggctccgacgtgcgcggcgcacagtggcttcgtgttgcacgccagttccaa
ctccgtctcagcatgcgtacgccggataggtcgcgagtcacattcgacggcttccgacgc
gatgactttgaaaaggtcaagcgcacgctgaacgagtactttggcgtcacggtcgaccac
agagatgtcgctttgaagggctggaactggggcaaggctaccgtgcagaaccaggacatc
gtcttcgaggttcagcacaagcctgcattcgagctgcccctcggccaggtcgccaactcg
aacatcgccggcaagaacgaggtcgccattgagtttgcgcccaccgctgcttcagacggc
gccagcaacaacgctcgcctgccggacgagctcgttgaagtgcgcttctacgtcccagga
aagagcaagaaggccaaggggagcgacgccggcagtgacggggaggagacggagaaggac
gaggaaggcaatgacatttccgcagccgaggccttccacaccctcatcaaggacaaggct
gacctgggtgcggccactggtgattccatcgtcgttttcgaggacgtcctggttcttact
cctcgtggtcgcttctcgatcgagttctttcccgagagcctccgtctgctcggaaagagt
accgactaccgcgtgcccttcacctccatcaatcgcatattcctccttcccaagctcgac
gacatgcacgtccagctcgttctgggtcttgaccccgcgatccgccagggtgcgacccgc
taccccttcctggtggcccagtggcccaaggacgaggaggttgacgccgagctcaacctc
gacgacgacgagattgcaaagtatcccgatcttcagaagaactaccacgcgcccactttc
caagtcatctcgcgtgtcctcaagtcgttgacaggcaagaaggtgacgcctccaggctcg
ttcaggaatgcgcagggtgtcaatggtatcaaggccaacgtcaaggctgtgcagggagag
ctgtacttccttgagcggggcctcatctttatcgccaagcagcccatcctcatcgacttt
agcaagacggagagcattgcgttctcgcgtgtcggcggtggcatcgcctctgcgcgtaca
ttcgacatgcgcgtcttagcgagcgacggtcctgaccacgtgttttcggccatctccaag
gaggaggccggtcccatctcgcagttcctgtccagcaagaacgtgcgcctcaagaacgag
atggacgagctcgaggccacggacaaaatggacatggacgacctctcggatgacgacgat
gacgtcagcatcatgtccgaggacgagggccggaagaagaagaagaagaagccgcagcag
cagcaggcgcctgtccgccgtcctgttgacgaggaggacgagtcagaagacgaggacttt
atggacgaggattcgtcggatggcggctcggtgagcgacagcgactcggaagcgagtgga
atggagtcggatgcgtccgaccccttgatggacgagctgcgcaagcgatccgaggcgcgg
gcgaagaagaaggcggcgggcgaggccgatggcgcgccgaagaagaagaaggccaagagg
gacgactag
DBGET
integrated database retrieval system
