Cutaneotrichosporon cavernicola: CcaHIS019_0405400
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Entry
CcaHIS019_0405400 CDS
T09540
Symbol
IPI3, CcaverHIS019_0405400
Name
(RefSeq) uncharacterized protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
ccac
Cutaneotrichosporon cavernicola
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccac03009
]
CcaHIS019_0405400 (IPI3)
Ribosome biogenesis [BR:
ccac03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
CcaHIS019_0405400 (IPI3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_HPS5
WDR55
ANAPC4_WD40
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
WDR54
Beta-prop_LRRK2
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
PEP5_VPS11_N
Beta-prop_VPS8
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
PROPPIN
NBCH_WD40
IncE
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
85495590
NCBI-ProteinID:
XP_060456985
UniProt:
A0AA48L4D4
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All DBs
Position
4:complement(join(1379164..1379662,1379698..1380227,1380269..1380631))
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AA seq
463 aa
AA seq
DB search
MALQELILSSSSAAESSQSSARTTFTPAIQLHDLTTTAHVQAFKTSSNAKNCLAYVPSRD
GLGGTVWAVQEGKAIVGVWAWQKDQQHLKFHLPERLTCLSISPNGIWAAGGSQNGQVYMW
EIASGLMLASWNAHYRTVTSVSFSSDSAYLVTASADASVHVFLVSQLTDVESSSSPYSKP
LGSLGDHTLAITAVTLGKTMGVSGGKCWTASEDGTVKMWSFAAPFDLLATFVLPPSAVPT
TLAVDPAERFLYVGTKAGDVYLIPLYKRKAQMGRVEAVGGEGAGATPINLVTPCVHVDAA
VTCLSLSLSATHLLVGTSAGDIHVHSLPSHQHIRTISTHRGAISHLSTFPSPPDLIGKPV
RTEDWAVMDVRNLERMRTSRGAKDTQEVGVLLRPSCRTNLLSALRATPTRNIGSDPARRG
PVSDGADVAALQDEIRRLKGALDKAVKINEKMWSGVVDLKLTL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcaggagctcattctctcatcaagctccgccgccgagtcgtcgcagtcgtca
gcccgtacgactttcacgcccgcgatccagttgcacgacctgacgaccacggcacacgtc
caagcgttcaagacgtcgagcaacgccaagaactgccttgcttacgtgcccagccgcgac
ggcctgggtggaacggtctgggcagtgcaggagggtaaggcgattgtcggagtctgggcc
tggcagaaggatcagcagcatctcaagttccacctgcccgagcggttgacatgtctgagc
atttcgccaaacggcatctgggcggcgggtgggtcccagaacggccaggtgtatatgtgg
gagattgcatcgggattgatgctggcctcgtggaacgcgcactaccgtaccgtcaccagc
gtctccttcagcagtgactcggcgtacctcgtcaccgcatcagctgacgcgtccgtgcac
gtgttcctcgtgtctcagctcactgatgttgaaagctcatcgtcgccgtacagcaaaccc
ctgggaagcctgggcgaccacacgctggccatcacggcggtcacactcggaaagacgatg
ggggtttccggcgggaagtgctggaccgcctcggaggacggaacagtcaagatgtggtct
ttcgctgcgccattcgacctgctcgcgacgtttgtcctccctccatcagctgtcccgact
actctcgccgtcgacccagctgagcggttcctctacgtaggcaccaaggctggcgacgtc
tacctcatccccctctacaaacgtaaagcccagatgggccgtgtggaggctgtcggcggc
gaaggagctggtgcgaccccaatcaaccttgtgactccctgcgttcacgtcgatgccgcc
gttacctgcttgagcctttcgctcagcgctacacacctactggtgggcacctctgcaggt
gacatccacgtccactcgctgccttcccaccagcacattcgcaccatctcgacgcatcgc
ggtgcaatttctcatttgtcgacgttcccgagccctcccgatctcattggcaagccggtc
cgaacggaggactgggcagtgatggacgtccggaacctggagcggatgcgcaccagccga
ggagctaaagatacgcaggaggtcggtgtgcttctgcgacctagctgcaggacaaaccta
ttgtccgccctgcgtgctactcctacgcggaatattggcagcgacccagcaaggcgaggg
cctgtctctgatggggcggacgtcgctgctcttcaggatgagattcggcggttgaagggt
gcccttgacaaggcggtcaagatcaacgagaagatgtggagcggagtggtcgacttgaag
ttgaccttgtag
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