Cutaneotrichosporon cavernicola: CcaHIS019_0408630
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Entry
CcaHIS019_0408630 CDS
T09540
Symbol
CcaverHIS019_0408630
Name
(RefSeq) uncharacterized protein
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CcaHIS019_0408630 (CcaverHIS019_0408630)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccac03041
]
CcaHIS019_0408630 (CcaverHIS019_0408630)
Spliceosome [BR:
ccac03041
]
Complex A
U2 snRNP components
U2 related factors
CcaHIS019_0408630 (CcaverHIS019_0408630)
Complex B
CcaHIS019_0408630 (CcaverHIS019_0408630)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
zf_CCCH_4
RRM_5
Motif
Other DBs
NCBI-GeneID:
85495913
NCBI-ProteinID:
XP_060457308
UniProt:
A0AA48QW59
LinkDB
All DBs
Position
4:join(2230412..2230434,2230485..2230562,2230604..2230744,2230779..2231015,2231057..2231258)
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AA seq
226 aa
AA seq
DB search
MSTGRDIYGTEQDRVNCSFYLKIGACRHGDRCSRKHIRPGFSQTVLLPNVYNNPSHTTEG
AMMTPEELQADFDRFYEDFFIQLCKYGNVQEMHVCDNVGDHLEGNVYVRYEWEAEAAKAV
DQLNNRWYGMRPLHAELSPVSDFREACCRQNELGECKREGYCNFMHLCHPTKSLVSNLQG
SQRISRRKAANGGITGADTGELGWVPGARGGGPPQDEGLGWVPGRR
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggtcgtgacatttatggtactgagcaggatcgcgtaaactgctcgttctac
ctcaagattggtgcttgtcgccacggcgatcgttgctcgcgtaagcacatcagacccggg
ttctcgcagacagtgctcctcccaaacgtgtacaacaacccgtcgcacaccactgaggga
gccatgatgacgcccgaggagctacaggccgactttgaccgtttctacgaggacttcttc
atccagctgtgcaagtacggtaacgtgcaggagatgcacgtgtgcgacaacgtcggcgac
cacctcgagggcaacgtctacgtgaggtatgagtgggaggctgaggcagccaaggcggtc
gaccagctcaacaaccgttggtacggcatgcgtccgctgcacgccgagctgtccccggtg
agcgacttccgtgaggcctgctgccgccagaacgaactcggtgaatgcaagcgcgaggga
tactgcaactttatgcacctgtgccacccgaccaaaagcctggtatccaacctgcagggg
agccagcggatatcgcgccgcaaggctgccaacggcggcatcacaggtgccgacacgggc
gagcttgggtgggtgccaggggcccgtggcggcggtccgccgcaggacgaggggcttggc
tgggtgccagggcggaggtag
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