KEGG   Cutaneotrichosporon cavernicola: CcaHIS019_0408720
Entry
CcaHIS019_0408720 CDS       T09540                                 
Symbol
CcaverHIS019_0408720
Name
(RefSeq) uncharacterized protein
  KO
K06634  cyclin H
Organism
ccac  Cutaneotrichosporon cavernicola
Pathway
ccac03022  Basal transcription factors
ccac03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CcaHIS019_0408720 (CcaverHIS019_0408720)
  09124 Replication and repair
   03420 Nucleotide excision repair
    CcaHIS019_0408720 (CcaverHIS019_0408720)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccac03021]
    CcaHIS019_0408720 (CcaverHIS019_0408720)
   03400 DNA repair and recombination proteins [BR:ccac03400]
    CcaHIS019_0408720 (CcaverHIS019_0408720)
Transcription machinery [BR:ccac03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CcaHIS019_0408720 (CcaverHIS019_0408720)
DNA repair and recombination proteins [BR:ccac03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CcaHIS019_0408720 (CcaverHIS019_0408720)
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N
Other DBs
NCBI-GeneID: 85495922
NCBI-ProteinID: XP_060457317
LinkDB
Position
4:join(2247404..2247960,2247993..2248146)
AA seq 236 aa
MPTCLYLAAKTTNHNIPIEVFVKKFEKFKAEEVLDLEFLVAQSLSFEFWVRGAERALRGW
ALELQSSPIGGAGERAQRALPKALQALSASRMTDAEFLFTPAQIALACWRVADKELTDAF
LAAKYNGAEEDKVPFGMPQDELLRISGQVESMIRTGEAQHDLKKVKEVDKRLKGCANPEK
VPGTALYVKRKAELEAKAAQEKKEKQDRAARAHEADGMVFGGELKAPTSNGGPLEE
NT seq 711 nt   +upstreamnt  +downstreamnt
atgcctacctgtttatacctggccgccaagacgaccaaccacaacatccccatcgaggtg
tttgtcaagaaatttgaaaagttcaaggccgaggaggtactcgacctcgagttccttgtt
gcccagagtttgagctttgagttctgggtgcgcggagccgagagggcactgcggggttgg
gcactcgagttgcaatcttccccgattggtggggccggagaacgcgcacagcgcgcattg
ccaaaagcgttgcaggcgctttcggcgagtcggatgacggacgccgagttcttgttcacg
ccggcacagattgcgcttgcatgttggcgggttgcggataaggagttgaccgacgccttc
ctcgccgcaaagtataatggtgcggaggaagacaaggtcccctttgggatgcctcaggat
gagcttttgcgtatttcgggacaagtcgagtccatgatccggactggggaggcgcagcac
gacctcaaaaaggtcaaggaggttgacaagcgcctcaagggatgtgcaaaccccgagaag
gttcctggcactgcattatacgtcaagcgcaaggcggagctggaggccaaggcggcgcag
gagaagaaggagaagcaggacagggcggcgcgcgcacacgaggccgacggtatggtgttt
ggcggggagttgaaggcgccaacatccaacggcggcccactcgaggagtaa

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