Cutaneotrichosporon cavernicola: CcaHIS019_0408910
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Entry
CcaHIS019_0408910 CDS
T09540
Symbol
prp10, CcaverHIS019_0408910
Name
(RefSeq) uncharacterized protein
KO
K12828
splicing factor 3B subunit 1
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CcaHIS019_0408910 (prp10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccac03041
]
CcaHIS019_0408910 (prp10)
03036 Chromosome and associated proteins [BR:
ccac03036
]
CcaHIS019_0408910 (prp10)
Spliceosome [BR:
ccac03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
CcaHIS019_0408910 (prp10)
Complex B
CcaHIS019_0408910 (prp10)
Complex C
U2 SnRNP specific factors
CcaHIS019_0408910 (prp10)
Chromosome and associated proteins [BR:
ccac03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
CcaHIS019_0408910 (prp10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPP2R1A-like_HEAT
TOR1L1_N
SF3b1
HEAT_EZ
HEAT_2
HEAT_EF3_N
HEAT
HEAT_ECM29
Vac14_Fab1_bd
Htt_N-HEAT_1
Adaptin_N
XMAP215_CLASP_TOG
mTOR_dom
MMS19_C
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
85495941
NCBI-ProteinID:
XP_060457336
UniProt:
A0AA48QW80
LinkDB
All DBs
Position
4:2297569..2301006
Genome browser
AA seq
1145 aa
AA seq
DB search
MADEETNGAYPKLASYTAPQEVLDEHAAMAEEDTEPDEFQERRNVKQISQRQSDYQLRRF
QRRDGVGEGEDESYEDRMRRVNLEREEDRVRKFKEQKAREEAEQGVPQITEDDKTPPRAL
LEGDATPPRAIAGGDTPPRRKRWDEDEDGDAKAEPDRKRSRWDETPEEAEAKPKKRRSRW
DQAPAEEDKPSSLAVKEEKVAAAAPQMVEDRRYRAITDDELNSLLPGKADGYETVLPPED
YVPMPAVRKMVPEDSQHASTGFMMQDENAAARAVQAAGGFQGTGEQTEIEGIGTLQFLKP
EDAQYFAKVLGEGGSEADDVHYTLDDLKERKIMRLLLKIKNGTPPVRKTALRQITDKARE
FGAGPLFDKILPLLMERSLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDE
DYYARMEGREIISNLAKAAGLAHMISTMRPDIDHVDEYVRNTTARAFAVVATALGIPALL
PFLKAVCRSKKSWQARHTGIRIIQQIAMPGMMGNGVLPHLRNLVDAIAHGLEDEQQKVRT
MTALALAQLAESAAPYGIESFDNVLKPLWLGIRQHRGKTLAAFLKAIGYIIPLMDPEYAG
YYVKECMPILIREFQTSDEEMRRIVLQVIKQCAGTEGVQPTFIRQEVLPEFFKAFWVRRM
ALDRRNYRQLVETTVELAVKAGVSEIVGRITNDLKDESEPYRKMVMETIQKVVQANGAAD
IDERMEQLLIDGLIFAFQEQTLEDTVMLDGFAAVVGALGGRVKPYLPQIVSMILWRLTNK
SAKVRMLAADLTTKLAPIIKQNDEDQLLSKLGVVLFEQLGEEYPDALGSIIAAEASIANV
VGMTQMNPPVKDLLPRMTPILRNRHEKVQEATINLIGRIADRGAEFVAAKEWMRICFELL
DLLKAHKKAIRRAAVNSFGYIAKAIGPQDVLSVLLTNLKVQERQSRVLSTVAIAIVAETC
GPFTCIPAILNEYRTPELNVRNGCLKALAYVFQYVGEMSKDYIHSVIGLLEDSLTDRDHV
HRQTACAIVKHLTIGVAGLGYEDALTHLLNLVWPNVFETSPHVIGGVMDAVEAMRVGLGP
GVVLSYVLQGLYHPARRVREVYWRMYNTLVVGSVDAMVPFLPALGSSADLATGQDYTRHH
LLMWV
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaggagacgaacggggcgtacccgaagctcgcgtcttacacggcaccgcag
gaagttctcgacgagcatgcggcaatggctgaggaggacactgagccggacgagttccag
gagcgccggaacgtcaagcagatctcccaaaggcagagcgactaccagctgcggcggttc
cagcggcgcgatggagtcggggagggagaggacgagagctacgaggaccgtatgcgtcgc
gtaaacctcgagcgtgaggaggatcgcgtgcgcaagttcaaggagcagaaggcgcgcgag
gaagctgagcagggcgtgccccagatcaccgaggacgacaagacgccaccacgggctctg
cttgagggcgacgcgacgccaccacgagctattgctggcggagacacgcctccgcgtagg
aaacgctgggacgaggacgaggacggggacgccaaggcagagccagaccggaagcggtcg
cgatgggatgagacgcccgaggaggccgaggccaagcccaagaagcggaggtcgcgctgg
gaccaggcgccggcggaagaagacaaaccctcgtctctcgcagtcaaggaggagaaggtc
gctgcggccgcgcctcagatggtcgaggacaggcggtaccgcgcgatcacggacgatgag
ctcaactcgctccttcccggcaaggcggacggctacgagaccgtgctgcctcccgaggac
tatgttccgatgcccgccgtgcgcaagatggttcccgaggactcgcagcacgcctcgacc
ggctttatgatgcaggacgagaacgcggctgcgcgtgctgtacaggccgcgggtgggttt
cagggaacaggcgagcagacggagatcgagggcatcgggacgctacagttcctcaagccc
gaggatgcgcagtactttgccaaggtccttggcgagggcggtagcgaagccgacgacgtg
cactacacgctcgacgacttgaaggagcgcaagattatgcgcctcctgctcaagatcaag
aacggcacaccacccgtgcgcaagaccgcgttgcgacagatcacagataaggcgcgcgag
ttcggtgctggacctctgttcgacaagatcctgccgctgctcatggagcgctcgcttgag
gaccaggagcgtcacctgctcgtcaaggtcatcgaccgcatcctgtacaagctcgatgac
cttgtgcggccatacgtgcacaagatccttgtggtcatcgagccgctcctcatcgacgag
gactactacgcgcgcatggagggtcgcgagatcatctcgaacctcgccaaggcggcaggc
cttgcccacatgatctcgacgatgcgaccagatatcgaccacgttgacgagtacgtgcgc
aacacgactgcgcgcgcgttcgccgtcgtcgccaccgcgctcggtattccggcgctcctc
cccttcctcaaggccgtgtgccgctccaagaagagttggcaggcgcgccacacaggtatc
cgcattatccagcagatcgctatgccgggcatgatgggcaacggtgtgctgccacatctg
cgcaacctcgtcgacgcaatcgctcatggattggaggacgagcagcagaaggtgcggacg
atgacggcgctcgcgttggcacagctcgccgagtcggccgccccctacggtatcgagtcg
tttgacaacgtcctcaagccgctctggcttggtatccggcagcaccgcggcaagacgctc
gcagcgttcctcaaggccatcggctacatcatcccgctcatggaccccgagtacgcgggc
tactacgtcaaggagtgcatgccgattctgatacgcgagttccagacaagcgacgaggag
atgcgccgcatcgttctgcaggtcatcaagcagtgcgcgggcaccgagggcgtgcagccc
acgtttatccggcaggaggtgctgcccgagttcttcaaggcgttctgggtgcgccgcatg
gcgctcgatcgccgcaactacaggcagttggttgagacgactgtcgagctggccgtcaag
gcaggcgtgtccgagattgttgggcgcatcaccaacgatctcaaggacgagagcgagccg
taccgcaagatggtgatggagacgatccagaaggtcgtgcaggccaacggcgccgcggac
atcgacgagcgcatggagcagttgcttatcgacggccttatctttgcattccaagagcag
acgctcgaggacacggttatgcttgatggctttgcagccgtcgtcggtgcgctcggcggg
cgtgtcaagccatacctgccacagattgtgtcgatgattctgtggcgtctgacgaacaag
agcgccaaggtgcgcatgctggccgccgaccttacgaccaaactcgcaccgatcatcaag
cagaacgacgaggaccagctgctgtccaagctcggtgttgtgctgtttgagcagcttggt
gaggagtacccagatgcgcttggctccatcattgcagccgaggcgagtatcgccaacgtc
gtcggtatgacgcagatgaacccgccagtcaaggacctgctgccccgtatgacaccaatc
ctgcgtaaccgtcacgagaaggtgcaggaggcgacgatcaacctcatcggccgtattgcc
gaccgcggtgccgagtttgtcgcagccaaggagtggatgcgcatctgcttcgagctgctc
gacctgctcaaggcgcacaagaaggcgattcgccgtgcagctgtcaactcgttcggatac
attgccaaggccattggcccgcaggatgtcctctccgttctcttgaccaacctcaaggtg
caggagcgccagtcgcgtgtgctctcgaccgttgcgattgccatcgtggcggagacctgt
ggtcccttcacctgtatccctgcgattttgaacgagtaccgcacaccagagttaaacgtg
cgcaacggctgtctcaaggccctggcatacgtgttccagtatgtcggtgagatgagcaag
gactacatccactctgtgatcgggctgctcgaggactcgctcacggaccgcgaccacgtg
caccgccagaccgcttgcgcgattgtcaagcacttgaccattggcgtcgccggcttggga
tacgaggacgcgctcacacatcttctcaaccttgtgtggccgaacgtcttcgagacgtca
ccgcacgtcatcggcggcgtgatggacgcggtcgaggcgatgcgcgttggactggggccc
ggtgtcgtactctcgtacgtcctgcaggggttgtaccatcccgcacggcgcgtgcgcgag
gtgtactggcgcatgtacaacacactcgtggtgggctctgtcgacgccatggttcccttc
cttcccgcattagggagctcggcggacctggccacggggcaggactacacgcggcaccac
ctcctcatgtgggtgtag
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