Cutaneotrichosporon cavernicola: CcaHIS019_0408980
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Entry
CcaHIS019_0408980 CDS
T09540
Symbol
RAD10, CcaverHIS019_0408980
Name
(RefSeq) uncharacterized protein
KO
K10849
DNA excision repair protein ERCC-1
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03420
Nucleotide excision repair
ccac03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CcaHIS019_0408980 (RAD10)
03460 Fanconi anemia pathway
CcaHIS019_0408980 (RAD10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccac03400
]
CcaHIS019_0408980 (RAD10)
DNA repair and recombination proteins [BR:
ccac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
CcaHIS019_0408980 (RAD10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad10
HHH_2
HHH_5
DUF1365
Imm49
DUF1427
Motif
Other DBs
NCBI-GeneID:
85495948
NCBI-ProteinID:
XP_060457343
LinkDB
All DBs
Position
4:join(2313369..2313406,2313602..2313644,2313707..2313810,2313848..2313947,2313984..2314060,2314098..2314269,2314306..2314746)
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AA seq
324 aa
AA seq
DB search
MDPPPPPTKSGSLPAASKNAIVYSVLQRRNPILPLIRSVGLEIGDIVVDYQVGAHNGVLF
LSLKYHRLHPEYIHSRIEKMRHAYNLRILLILCDISEHQQSLRELSKVAVINEMTILVAF
SNEEAAQYLTTLKAYEHKSADTLKEKVHQTYPSQLQHVLTSGRKVNKSNAEAIAAQFGSF
DNIVRQSNYSLSAVKGLGKVKIVSLLDAFNKPFVAGLGTASQTRTPVASTIQAQEVTPVA
EADSDSGSSSSLIDDGIEPAQLSDIRPPTPPTPTRPRDQGPSRSPSLEPDDPSRRKSDIV
WHDPLDDDDDGDETDGRDPKRQRV
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggacccaccaccgcctcccacgaagtcgggttcattgcctgcggcgagcaagaacgcc
atcgtgtacagtgtattgcagaggcgcaaccccatccttcccctcatccgaagcgttggt
ctcgagattggtgacatcgtcgtggactaccaggtcggcgctcacaacggtgtgctgttc
ttgagcctgaagtatcatcgtttgcatcccgagtatatccactcgcgaatcgagaaaatg
aggcacgcttacaacctccgcatcttgttgattctgtgtgacatcagcgagcaccaacaa
tctctccgcgaattgagcaaggttgcggtcatcaacgagatgacgatcctcgtggcgttc
tccaacgaggaagctgcccagtacctgaccaccctcaaggcatatgaacacaagtcagcg
gacacgctcaaggagaaggttcaccaaacatacccgtctcaactgcagcacgttctcacc
agcggtcggaaggtcaacaaatctaacgcggaggccatagcagcgcagttcgggtcgttt
gacaacatcgtccgacagtccaactactctctcagcgccgtcaaggggttaggcaaggtc
aagatcgtctctctcctcgacgcgttcaacaagccctttgtcgcaggtctgggcacggcg
tcgcagactcggacacctgttgcgtcgaccattcaggcgcaggaagtgacacctgtggcg
gaggctgattctgactctggctcgagctcctctctcatagacgacggtatcgagcctgcc
cagttgtcagacattcgcccgcccaccccaccaacgcctacccggcctcgggaccaggga
ccaagtcgttcacctagcctggagcctgacgacccctcgcgacggaagagcgacattgta
tggcatgacccactcgacgacgacgatgacggcgatgaaaccgacggccgagatccgaag
cgacagcgagtgtaa
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