Cutaneotrichosporon cavernicola: CcaHIS019_0501200
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Entry
CcaHIS019_0501200 CDS
T09540
Symbol
CcaverHIS019_0501200
Name
(RefSeq) uncharacterized protein
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CcaHIS019_0501200 (CcaverHIS019_0501200)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccac03041
]
CcaHIS019_0501200 (CcaverHIS019_0501200)
Spliceosome [BR:
ccac03041
]
Complex A
U2 snRNP components
U2 related factors
CcaHIS019_0501200 (CcaverHIS019_0501200)
Complex B
CcaHIS019_0501200 (CcaverHIS019_0501200)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
85496362
NCBI-ProteinID:
XP_060457757
UniProt:
A0AA48QWS6
LinkDB
All DBs
Position
5:join(271674..271686,271727..271771,271817..272320,272361..273592)
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AA seq
597 aa
AA seq
DB search
MDGYDALDAATSSYTKHRDDRASHRDDRDRDRDRDRDRRHRDRDYDRDRNDRRPHDRDPY
GREGGRDRDPNERRNRDRDYDRRDRDRHDDRGRDQGRDRDPYGRRDERGWSPPRRRDDRG
GYGREPPRDGGRGGGPRGGGGRRRDSPARSPTPTDAIPLEDRVVEPSLWDLAPPEFQGIS
ALEAKMTGMFTYGPGRVAPPMHLGQLAAGLINPLRQNKRVYQADIPDTVSEKQLMRFWNR
LMTDRNKASVPGECVNQVQVNREKKFAWVEFRNANEATAALELNGTEFEGAPMELKRPKD
YIGIDPALGFLGPATEGNNKLFVGGLPTNLGNEQVMELLKSFGELRTFNLVKEGNGSVSK
GFAFVEYLDPAVTDMAIQGLNGFQIGERALVVQRAATTNRATGGAQEHGAAAFLATSKIL
EEADAEPADTRVMLMLNMVTEDELYDDQEYEDILLDVKEECEKYGVVEGVRIPRPVPKST
KWETSDSAAQTAEKNRRINEEAGVGRVYVMYTDIPGCQKAMKALGGRQFGGRTILVASTS
EEDFMGPAPPPPPSEPPMQLEAPPPPPVAAVPAPPAPPAAPEDMDQTAGNLLAELGV
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggacggctacgacgcgctggacgcagcgacctcgtcgtataccaagcaccgcgacgac
cgggcgagtcaccgcgacgaccgagaccgcgaccgcgaccgcgaccgggaccgccggcat
agggacagggactacgaccgggaccgtaacgaccggcggccacacgaccgtgatccctac
ggacgtgaagggggacgcgaccgcgatcccaatgagcgccgcaaccgtgatcgcgactat
gataggcgggaccgcgaccgccacgatgaccgggggcgcgaccaggggcgtgatcgtgac
ccatatggtcgtagagacgagcgtggatggtcgccgcctcgccgccgcgacgaccgaggc
gggtatgggcgcgagccgcctcgcgatggaggccgcggcggcggacccagagggggagga
gggcggcgtagggactctccagcccgctcgccgactccgacggacgctattcctctcgag
gaccgtgttgtcgagccgtcgctgtgggacctcgcgccgccagagttccagggcatctcc
gccctggaggcgaagatgactggcatgttcacttacggtcccgggcgcgtcgcacctccc
atgcatcttggccagctcgccgcgggcttgattaaccccctgcgccagaacaagcgcgtg
taccaggccgacatccctgacaccgtgtcggagaagcagctcatgcgcttctggaaccgc
ctcatgacagaccggaacaaggcctctgtgcccggagagtgtgtcaaccaggtccaggtc
aaccgcgagaagaagtttgcttgggtcgagttccgcaacgccaacgaagcgacggctgcg
ctcgagctgaacggcactgagtttgagggcgcaccgatggagctcaagcggcccaaggac
tacatcggcattgaccccgccctcggcttcctcggtcccgcgaccgagggcaacaacaag
ctgtttgttggtggcctccctaccaacctgggcaacgagcaggttatggagctgctcaag
tcgttcggtgagctgcgcaccttcaacctcgtcaaggagggcaacggctcggtgtccaag
ggcttcgctttcgtcgagtaccttgacccggcggttacggacatggcgatccagggcttg
aacgggttccagattggcgagcgtgcgctggtggtgcagcgtgcggcgacgacgaaccgc
gcaacaggcggtgcgcaggagcatggcgcggcggccttccttgcgacctccaagattctc
gaggaggcggacgccgagcccgccgacacgcgcgtcatgctcatgctcaacatggtgacc
gaggacgagctgtacgacgaccaggagtacgaggacattctgctcgacgtcaaggaggag
tgtgagaagtacggtgtcgtcgagggcgtgcgtatcccccgccctgtacccaagagcacc
aagtgggaaacgagtgattcggccgcacagacggccgagaagaaccgtcgaatcaacgag
gaagcgggcgtcggccgcgtctacgtgatgtacacggacatcccgggttgccaaaaggcc
atgaaggcgttgggtgggcggcagtttggcgggcgtaccatcctcgtcgccagcacaagc
gaggaagactttatgggaccggccccgccgccgccgccatctgagccgccgatgcagctc
gaggcgccaccccctcccccggtcgccgcagtacccgcaccgccggcaccccctgcggct
cccgaagacatggatcagacagctggaaacctcctcgccgagctaggcgtgtag
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