Cutaneotrichosporon cavernicola: CcaHIS019_0502000
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Entry
CcaHIS019_0502000 CDS
T09540
Symbol
CcaverHIS019_0502000
Name
(RefSeq) uncharacterized protein
KO
K14308
nuclear pore complex protein Nup54
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CcaHIS019_0502000 (CcaverHIS019_0502000)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0502000 (CcaverHIS019_0502000)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CcaHIS019_0502000 (CcaverHIS019_0502000)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
85496442
NCBI-ProteinID:
XP_060457837
UniProt:
A0AA48L609
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All DBs
Position
5:join(447631..447646,447691..447744,447784..448732,448767..449373)
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AA seq
541 aa
AA seq
DB search
MAFSFAAAAQPQAQAQPTTSLFGANQAASTSTSSPFGGFGAAANTQPAASAPAGLGLFGG
ANNAAAGSSTSLFGQQAKPAGGLFGSGTAAPASTPTAGAGWFGSNAAPQSTGGGLFGSTG
AQPQQQPGGLFGSGQPQQQQGGGLFGSATAQPQQQSGGLFGSTGNAQQSGGLFGQTAQKP
AGAGLFGSTTAQPAAGGSLFGSATQPQQAAGGLFGASTAQPQQSSLFAPKPAGGLFGSTA
QPQQPTGLFASTTQQPQQNMFASTSQPLAQSTAPPQGQDIESRIVTIKNAWDDNSPDCRF
KYFFYNVVDPGTSQAYGRPISATDDSKWLRAMRDNPDPQNMVPVLATGWKDVKKRVEMQE
QAASVHQQRIKELNQALANLSRQTSLSSSVRLQALQAQLAQLTQRLLALAAKSPSFAPVQ
SSAFRPEEGEMKHTLEEVKDALDGRTKPSRGVGLGTQRSATKGRMLGQVNELWGLVEEVR
RQRRARGHDAQVWAGDEKLLTEIAIVLDQQQAALTKLSGLASDNVFDADVMREGLAAVEK
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccttctccttcgctgctgctgcgcagccacaggcccaggcgcagcctacaacctct
ctgtttggtgccaaccaggctgcgtcgaccagcacgtcatcgccgtttggcggatttgga
gcggctgcgaacacgcagcctgcggcgagcgctccggcgggtttgggcttgttcggtggc
gcaaacaatgctgctgccggaagcagcacgagcctctttgggcaacaggcgaagcctgcg
ggcggcctgtttggttctgggacggcagctcccgcatcgacacccaccgcgggggcgggg
tggttcggctctaacgcggcccctcagagcacgggcggtgggttgtttggatcgacgggg
gcacaacctcaacaacagccaggcggcctgttcggatcgggacagccccaacagcagcag
ggtggtggtctctttggatcagcaacagcgcaacctcagcagcagagcggtggcctgttc
gggtcgacggggaacgcgcagcagtcaggggggctgtttgggcagactgctcagaagccc
gcgggggcagggctgtttgggtcaaccacagcgcagccagcagcaggaggcagcctcttc
ggatctgccacgcagccgcagcaggcagcaggtggtctcttcggcgcgtctaccgcacag
cctcagcagagcagtttgttcgcacccaagccagcaggcggcctattcggctcaaccgcg
cagccacagcagccgacgggcctgttcgcctctacgacccagcagcctcaacagaacatg
tttgcgtcgacgtcgcagcctctcgcgcagtccactgccccaccacaggggcaggacatt
gagagccggatcgtgaccatcaagaacgcttgggacgacaacagccccgactgccgcttc
aagtactttttctacaacgttgtcgaccccggcacgtcgcaggcgtacggacggcctatt
tctgcgacggacgactcgaagtggttgagagctatgcgtgacaacccggacccacaaaac
atggtgccggtgctagcgacagggtggaaggacgtgaagaagcgtgtcgagatgcaggag
caggcggcgagcgtgcaccagcagcggatcaaggagctgaaccaggcgctggcgaacctc
tcgcgccaaacctcgctgtcttcaagcgtgcgcctgcaggcactgcaggcacagctcgcg
cagttgacacagcgtctgttggcgctggcggcgaagagtccttcgtttgcgcctgtgcag
agctcggcgttccgtcccgaggagggcgagatgaagcataccctcgaggaagtcaaagac
gcgctggacgggcggacgaagccgtcgcgcggggtgggactgggcacgcagcggtcggcg
accaagggccgcatgttgggccaggttaatgagctttggggtctcgtggaggaggtgcgg
cgccagcggcgcgcgcggggccacgacgcgcaggtgtgggcgggcgacgaaaagctcctt
accgagattgcgattgtgctcgaccagcagcaggcggcgcttaccaagctgagcgggctg
gcgagcgacaacgtgtttgatgcggacgttatgcgcgagggacttgcggcggtcgagaag
aagtag
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