Cutaneotrichosporon cavernicola: CcaHIS019_0504870
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Entry
CcaHIS019_0504870 CDS
T09540
Symbol
CcaverHIS019_0504870
Name
(RefSeq) uncharacterized protein
KO
K12840
splicing factor 45
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CcaHIS019_0504870 (CcaverHIS019_0504870)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccac03041
]
CcaHIS019_0504870 (CcaverHIS019_0504870)
Spliceosome [BR:
ccac03041
]
Complex A
U2 snRNP components
U2 related factors
CcaHIS019_0504870 (CcaverHIS019_0504870)
Complex B
CcaHIS019_0504870 (CcaverHIS019_0504870)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G-patch
Motif
Other DBs
NCBI-GeneID:
85496729
NCBI-ProteinID:
XP_060458124
UniProt:
A0AA48L6G7
LinkDB
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Position
5:join(1232539..1232617,1232711..1232976,1233006..1233781,1233824..1234334,1234373..1234432)
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AA seq
563 aa
AA seq
DB search
MSLFAGISFTSDKAKALAAESAAAAGAPTPPSSTPVPKQPPPSRAALQFAPRAKKPPPKP
TYSAAPVIAAPPTISAPPPPPPEDGENENGNEPRAPAMTLASKRRPDAQRKKKKKKRRVY
HAFDPDEPYDPARPNDLGEYQAYRARLRLERGDSSSESDTPRRDAPRLWAPPREYAANAV
PAAANPYQNQRERTPPEDAHARPVAMGSGEDIYARRAAMSATGDDAYARRVAMSATGDDA
YARRAAMSQSGPGLPTRPPAAQAGLPPPGLITGLPPRPPAPVRPPFPPPVRPDGAMPFPP
PPMPPMPPTRPPEAALPTPPFPPPIARPAPAGPPPAPVDDAYAKELEAKRAAAMAIAAKF
GMAPPAPKEPEEEDASGTFAERMMRKWGHKEGSGLGARGDGITEALSAEHVAGTTKLSKR
AAAKARAAKANGRWVQAPNARGRIVDASSSAAREAEVEKHGEVSRIVVLLNTVETEDDVD
ETLADDIGTEAGKHGIVERVVLHITEPPAEGEGCLRVFVVFSGMAGAWRAVKALEGRFFG
GRTIHARYFDEERFERGERDGPL
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcttcgcgggcatcagctttacgagcgacaaggcaaaggctctggctgccgag
tcggccgcggccgcgggagcgccaacaccaccttcatccacgccagtacctaagcaacct
cccccgagccgcgcagcgctacagttcgcgccacgcgccaagaaacccccgccgaagcca
acctactctgcagcaccagtcatcgccgcaccgcccaccatctctgcccctcctccccct
cctccagaagatggggaaaacgagaacgggaacgagccccgcgcgccggccatgacgttg
gcgtcgaaacgccgaccagacgcacagcgcaagaagaagaagaagaaacgccgcgtctac
cacgccttcgaccccgacgagccgtacgatccggccaggcctaacgatctcggagagtac
caggcctaccgtgcgcgcttgcggttggagcgcggcgactcgtcaagtgagagtgatacg
ccgcgccgcgatgcaccgcgtctctgggccccaccgagggagtatgccgcaaatgccgta
cccgctgccgcgaacccttaccagaaccagagggagaggacgccgccggaggacgctcat
gcccgccccgtggcgatgggatcaggagaggacatttatgctcgccgtgcagcgatgagc
gcaacaggtgacgacgcgtatgccaggcgtgtggctatgagtgccactggcgacgacgca
tatgctcgccgggcagccatgtctcaatccggaccaggtctgccaacacggccacctgca
gcacaggctggccttccccctccaggactgataactggcctcccgccccgcccacctgcg
ccagtacggccacctttcccgccaccagtgcggccagacggcgcgatgccgttccctcca
cccccaatgccgccgatgccaccaacgcgaccaccagaagcggctctacccacgccacct
tttccgccgccaatcgctcggccagcgccggctggaccaccaccagcaccggtggacgac
gcgtacgcaaaggagctggaggcgaagcgtgcggcagccatggccatcgcggcaaagttt
ggaatggcgccgccagcccccaaggaaccggaggaggaggacgcctcgggcacctttgcc
gagaggatgatgcgcaagtggggccacaaggagggatcaggtctcggtgctcgcggcgat
ggcatcaccgaagccctctcggcggagcacgtcgccgggactacgaaactgagcaagcgc
gcggcagctaaagcacgtgcggcaaaagcaaatgggcgctgggtacaagccccgaacgca
cgtggtcgtattgtcgacgcgtcgtcttccgccgccagggaggcagaggtggagaaacac
ggcgaagttagtcgcatcgtcgtcctcctcaacactgttgagacggaggatgacgtcgac
gagacgctcgcggacgatatcggcactgaggcgggcaagcatgggatcgtggagcgcgtc
gtactgcatattacggagccgcctgctgagggtgagggatgcctgcgcgtctttgtcgtg
ttctcggggatggcaggcgcgtggcgcgccgtcaaggccctcgaagggcggttctttggc
gggaggaccatccacgcgcgatactttgacgaggagcgcttcgagcgcggcgagcgtgat
ggcccgctgtag
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