Cutaneotrichosporon cavernicola: CcaHIS019_0506060
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Entry
CcaHIS019_0506060 CDS
T09540
Symbol
CcaverHIS019_0506060
Name
(RefSeq) uncharacterized protein
KO
K14574
ribosome maturation protein SDO1
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CcaHIS019_0506060 (CcaverHIS019_0506060)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccac03009
]
CcaHIS019_0506060 (CcaverHIS019_0506060)
Ribosome biogenesis [BR:
ccac03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
CcaHIS019_0506060 (CcaverHIS019_0506060)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_C
SBDS_domain_II
DUF6263
Motif
Other DBs
NCBI-GeneID:
85496848
NCBI-ProteinID:
XP_060458243
UniProt:
A0AA48L6R6
LinkDB
All DBs
Position
5:complement(join(1489780..1490256,1490287..1490460,1490723..1490774,1490813..1490844))
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AA seq
244 aa
AA seq
DB search
MQTKQPGTHIKLTNVSIVRIKKGGKRFEIACYKNKVNEFRSGVEKDLSEVLQIEQIFTNV
PKGQVAKKDDWTKAFKNEDMDAVIEEILRKGELQVNNLERGAQLASLSREIATMVTEMTV
DPTTGRKHTVGMVEKAMAELGYSVRGDKTAKAQALDLIRQLGADSILPVQRVRMRVRITM
PAKDGKRVKDKVVALIDEVEEEDIGAEWEAIVRVDPGAFRAINELVSNESKGKGRVESMG
SVST
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaaaacagccgggaacgcatatcaagctgacgaacgtgtccatcgtacggatc
aagaagggcgggaagcgctttgagatcgcatgctacaagaacaaggtcaacgagttccgt
tccggggtggagaaggatctctctgaagtcctgcaaatcgagcagatcttcaccaatgtc
cccaagggccaagtagccaagaaggacgactggaccaaagccttcaagaacgaggacatg
gacgcggtcattgaggagattctgcgcaagggcgagttgcaggtcaacaacctggagcgg
ggggctcaactcgcgtcgctgtcccgtgagatcgcgaccatggtcacggagatgacggtc
gaccctaccactgggcgaaagcataccgtgggcatggtggagaaggccatggccgagttg
gggtatagcgtgcgtggggataagacggcgaaggcgcaggcgctcgaccttattcgccag
cttggggccgactcaattctgcccgtgcagagggtacgcatgcgcgtgcggattaccatg
cctgcaaaagatgggaaacgcgtcaaggacaaggtcgttgcacttattgatgaggtcgaa
gaggaagatatcggcgccgagtgggaggctattgtgcgcgtggatcccggagctttccgc
gctatcaacgagctcgtctctaatgagagtaagggcaagggacgggtggagagcatggga
tcggttagcacgtag
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