Cutaneotrichosporon cavernicola: CcaHIS019_0506350
Help
Entry
CcaHIS019_0506350 CDS
T09540
Symbol
DBP2, CcaverHIS019_0506350
Name
(RefSeq) uncharacterized protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CcaHIS019_0506350 (DBP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccac03041
]
CcaHIS019_0506350 (DBP2)
03009 Ribosome biogenesis [BR:
ccac03009
]
CcaHIS019_0506350 (DBP2)
Enzymes [BR:
ccac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CcaHIS019_0506350 (DBP2)
Spliceosome [BR:
ccac03041
]
Complex A
U1 snRNP components
U1 related factors
CcaHIS019_0506350 (DBP2)
Complex B
CcaHIS019_0506350 (DBP2)
Ribosome biogenesis [BR:
ccac03009
]
Eukaryotic type
Pre-60S particles
Helicases
CcaHIS019_0506350 (DBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
DUF2443
Motif
Other DBs
NCBI-GeneID:
85496877
NCBI-ProteinID:
XP_060458272
LinkDB
All DBs
Position
5:complement(join(1562574..1562910,1562946..1562961,1563414..1564538,1564584..1564740,1564843..1564845))
Genome browser
AA seq
545 aa
AA seq
DB search
MSYGGGYGGGGYGGGGGYGGGGGYGGGGGGYGGGGGGQFSRGGHGGGFGGGFNGGDRMGN
LGSGLRNIDWQTAELTKFEKNFYIEDKDVSARSEEEITAFRKEKDMRIQGSNIPRPITNF
EEAGFPEYCMTEIRALGFKEPTPIQCQAWPMALSGRDVVAIAETGSGKTISFALPAMVHI
NAQPLLSPGDGPIALILAPTRELAVQIQAECTKFGKSSRIRNTAIYGGAPKGPQIRDLQR
GCEIVVATPGRLIDMLESGKTNLRRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTL
LFSATWPKDVQRLATDFLHDYIQVNIGSMDLTANHNVAQHVTVCSDFDKRQMLLKHLDQI
SRENAKVLIFVGTKRVADDLTKFMRQDGWPALAIHGDKQQAERDWVLAEFKSGRSPIMLA
TDVASRGLDVKDIAYVINYDFPNNCEDYIHRIGRTGRAGAKGTSFTYFTTDNSKQARELI
GILRESKSEVPPELEEMSRYGGGGGGGRGRGGRGYGGGRGGFRSGANSYGGGGGGGGDRG
YGNRW
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacggtggcggttacggcggcggcggctacggcggcggtggtggctacggtggc
ggtggtggctacggtggcggcggtggtggttacggtggtggtggtggtggtcagttctct
cgcggcggtcatggtggcggcttcggcggcggctttaatggtggtgaccgcatgggcaac
ctcggctctggcctccgcaacatcgactggcagacggccgagctcaccaagttcgagaag
aacttctacatcgaggacaaggacgtgtctgcgcgctccgaggaggagattactgcattc
cgcaaggagaaggacatgcgcatccagggcagcaacattccccgccccatcactaacttt
gaggaggctggcttccccgagtactgcatgactgagatccgcgcccttggcttcaaggag
cccacccctatccagtgccaggcatggcccatggccctttcgggtcgtgacgtcgtcgcc
attgccgagactggttccggaaagacgatctctttcgctctccctgccatggtccacatc
aacgcgcagccgctcctctctcccggcgatggccccatcgctctgatccttgcccccact
cgtgaactcgcggtccagatccaggccgagtgcaccaagttcggcaagtcgtccagaatc
cgcaacactgccatctacggcggtgcgcccaagggccctcagatccgcgacctccagcgc
ggctgcgagattgtcgtcgccactcctggccgtctgatcgacatgctcgagtctggcaag
accaacctccgtcgcgtcacctacctcgtcatggacgaggccgaccgcatgctcgacatg
ggtttcgagccgcagatccgcaagattgtctcgcagattcgccctgaccgtcagaccctc
ctcttctcggccacctggcccaaggacgtccagcgtctcgccactgacttcctccacgac
tatatccaggtcaacattggctcgatggacctcactgccaaccacaacgttgctcagcac
gtcacggtctgctccgactttgacaagcgccagatgctcctcaagcacctcgaccagatc
tcgcgtgagaacgccaaggtgctgatctttgttggcaccaagcgtgtcgccgacgacctc
accaagttcatgcgccaggacggctggccagcgctcgccatccacggcgacaagcagcag
gccgagcgcgactgggtcctcgccgagttcaagtccggccgcagccccattatgcttgcc
accgacgtcgcgtcgcgtggtcttgacgtcaaggacattgcctacgtcattaactacgac
ttccccaacaactgcgaggactacattcaccgtatcggccgtaccggtcgtgctggtgcc
aagggtacctcgttcacctacttcaccaccgacaactcgaagcaggccagggagctcatc
ggcattctccgcgagtccaagtcggaggtgcccccagagctcgaggagatgtctcgctat
ggtggtggcggcggcggtggccgtggccgtggtggccgtggttacggtggtggccgtggc
ggcttccgctcaggcgctaactcgtacggtggtggtggcggcggcggcggtgaccgtggc
tacggcaaccggtggtaa
DBGET
integrated database retrieval system
