Cutaneotrichosporon cavernicola: CcaHIS019_0506950
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Entry
CcaHIS019_0506950 CDS
T09540
Symbol
TFB2, CcaverHIS019_0506950
Name
(RefSeq) uncharacterized protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03022
Basal transcription factors
ccac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CcaHIS019_0506950 (TFB2)
09124 Replication and repair
03420 Nucleotide excision repair
CcaHIS019_0506950 (TFB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccac03021
]
CcaHIS019_0506950 (TFB2)
03400 DNA repair and recombination proteins [BR:
ccac03400
]
CcaHIS019_0506950 (TFB2)
Transcription machinery [BR:
ccac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CcaHIS019_0506950 (TFB2)
DNA repair and recombination proteins [BR:
ccac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CcaHIS019_0506950 (TFB2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
85496937
NCBI-ProteinID:
XP_060458332
UniProt:
A0AA48L6Y6
LinkDB
All DBs
Position
5:complement(join(1716819..1717297,1717331..1717746,1717784..1717881,1717915..1718008,1718060..1718197,1718238..1718354,1718392..1718546))
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AA seq
498 aa
AA seq
DB search
MVAQKFSDPSRADTGPEEQSPTAPLDRFLDSQPATFYENIYQSEATCLCMLRLLPPVCRQ
IILHVVWSHQTMRSAELKAFCGMDERLPPEAAEAIIRPALARHIFHPLSQKGGKAPKFHW
PLRDSFKHGLRNALTGLGTSNSFGVPYEGGGSAPSQEDLISHGEDSWEAILKYMVSSGNS
RRRPQDAVLDLLCNAGLMKDLHPTSRRSYSTLDMTAEGFSFLLQDRQTQLWHVLVAYIYG
KQHRGENAADVLSVFFSLGCMQLGQGYSASKSFPRAQAILEDLEQYGFIYRSPDAPDQFF
PTHLATSLCSGDLSESRSESADDKRFLILETNYKIYAYTSNELEIEILNLFVDIKIRYPN
LVVGKLDRQNVKNAMGKGITASQIISYLASHAHPQMYNHPPPLLHASITDQLHLWDRERN
RLDNKECKAPLVYPLTSTAVMFEFFSKELFDDAQDEATRMGCLQLGLPKEKLLFVDPDAR
ESMKDFIKEKQEQLRNGY
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggttgcacagaagttcagcgacccgtcgcgcgccgacactgggccggaggaacaatca
cccacggcacctttggatcgcttcctcgacagccagcctgcgaccttttacgagaacatc
taccagtcggaggcaacatgcctttgcatgctgaggctgctgcctcccgtgtgccggcag
atcatcctgcacgttgtttggtcgcaccagacgatgaggagtgcggagctcaaggcattc
tgcgggatggacgaacgcctcccgcccgaagctgccgaagccattattcgtccggcgttg
gcgcgtcacatcttccacccgttgtcgcagaagggaggcaaggcgcccaagttccactgg
cccctgcgagactccttcaagcatggactcagaaatgcactcactggactgggaacgtca
aattcgttcggagtgccgtatgaaggcggcgggtcagccccaagccaggaggacttgatc
agccacggagaagactcgtgggaggccattctcaagtacatggtgtcgtcggggaattct
agaaggcgtccacaggacgctgtgttggacttactctgcaatgccgggcttatgaaggac
ttgcatcccacttcgcggcgttcatacagcaccctcgatatgactgccgaaggcttctcg
ttcctcttgcaagaccgccagacccagctgtggcacgtcctcgtggcgtacatctacggc
aagcagcatcgaggcgagaacgcagcagacgtattatctgtcttcttctcgctgggctgt
atgcaactgggacagggatactccgcgtccaagagctttcctcgcgcgcaggccatcctt
gaagacctcgaacagtacgggttcatctatcgctcgccagacgcgccagaccagttcttc
ccgacacacctcgcaacttcgctgtgctcaggcgacctatctgagtcaaggtccgagagt
gccgatgacaagcgtttcctcattctcgaaactaactacaaaatctatgcgtacacttcc
aacgagttggagatcgagatcctcaacctcttcgtcgacatcaagattcggtaccccaac
ctggtcgttggcaaacttgaccggcagaacgtcaagaatgccatgggaaaaggcatcact
gcgtcacaaatcatctcgtacctcgcgagtcatgcgcatccccaaatgtacaaccaccct
ccaccattactccacgcgtccatcaccgaccagttgcatctgtgggatcgcgagcgcaac
cgtctcgataacaaagaatgtaaagctccacttgtgtatccgctgacgtcgacagcggtc
atgttcgagttcttctcaaaggagctgttcgacgatgcgcaagatgaagcgacgcgcatg
ggctgtttgcaactgggcctgccgaaggagaagctcctgttcgtggatcccgacgcgcgc
gagtccatgaaggactttatcaaggagaagcaggagcagctccgcaacggctattag
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