Cutaneotrichosporon cavernicola: CcaHIS019_0507360
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Entry
CcaHIS019_0507360 CDS
T09540
Symbol
HDA1, CcaverHIS019_0507360
Name
(RefSeq) uncharacterized protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ccac
Cutaneotrichosporon cavernicola
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccac01009
]
CcaHIS019_0507360 (HDA1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0507360 (HDA1)
04131 Membrane trafficking [BR:
ccac04131
]
CcaHIS019_0507360 (HDA1)
03036 Chromosome and associated proteins [BR:
ccac03036
]
CcaHIS019_0507360 (HDA1)
Enzymes [BR:
ccac01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CcaHIS019_0507360 (HDA1)
Protein phosphatases and associated proteins [BR:
ccac01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CcaHIS019_0507360 (HDA1)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
CcaHIS019_0507360 (HDA1)
Membrane trafficking [BR:
ccac04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CcaHIS019_0507360 (HDA1)
Chromosome and associated proteins [BR:
ccac03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
CcaHIS019_0507360 (HDA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2-like
Arb2
Ser_hydrolase
DUF1749
Motif
Other DBs
NCBI-GeneID:
85496978
NCBI-ProteinID:
XP_060458373
UniProt:
A0AA48QX83
LinkDB
All DBs
Position
5:complement(join(1821162..1821466,1821502..1821581,1821617..1822254,1822290..1822417,1822454..1823008,1823043..1823580))
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AA seq
747 aa
AA seq
DB search
MDFSNVPSTFPATAQHVVDSNAMDVDAPAGPSNTTAFEGNADASASQVNGVDSSLQRVHL
SQPMPPYPTMANPNLTFFYEDADNDSDSVVEKGRMVRTGYVFDPLMMLHCADGYTPTEDI
HDSGEGHPEEPMRIKRIFNRLKEQGLIRRMKRLDFAEAQKEQVRLVHTDDHWHKVQGTET
FTDEYIQETKNYYDHLSLYVCRETGHCARLSCGGVIQACRSVCEGEVRNAFAIVRPPGHH
AEPDEHMGFCFFNNVAVAAREVQRQGLAKKVLILDWDVHHGNGTQRAFWDDPNVLYISIH
RHDGGKFYPSSDFGALDMVGEGEGEGTSVNIPWPGPGFGDGDYIYAFQKIVMPIAYEFAP
DLVIISAGFDAADGDQLGCCNVTPAGYGHMTHMLCALAGGKVVVALEGGYNLRAISDSSL
AVAQVLLGETPAEIGQVQASELATEVIHEVAKVQSKYWKNVNAAACAPPEIGKGGGEYVT
TVPDLLKQHRLQHMYTKHKLFTVPLANTDLHEWFQNQVLVNEGLYESETETLVIFAHDFG
NLRVETDGVASVDVSLANSYLLDTSDAVVDWVRGRGWNLIDINVLRNLRSQFAKGPRMVS
NSGDKMDGQLMRYLWDNYVELSSAKNVVLIGHGTACGAVMELVNHRDVQSKVKAIVQVAG
MHSIVRPDPTNENRRTWFRDVCQIYLPHIHPLLGEERLYRRIGGQLRTARKAKVVDVLVE
ALPEIKEFVDSKLDPVQTNGHAIVDVV
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggacttcagcaacgtgccgtcgaccttccctgctactgcccagcatgtggtggatagc
aacgccatggacgttgacgctccagctggaccttccaacaccactgcgttcgaaggcaac
gccgatgccagcgcgtcgcaggttaacggtgtggacagttcgttacaacgcgtgcacctg
tcgcagccgatgccgccatatccgaccatggctaacccgaacctcactttcttctacgag
gatgcagacaatgacagcgacagcgtcgtcgagaaaggccgcatggtgcgcacaggctat
gtcttcgatcccctcatgatgctccattgcgccgatgggtacacgccgactgaggacatc
catgactcgggggaaggtcacccggaggagccgatgcgcatcaagcgcatcttcaatcgc
ctcaaggagcaagggctcatccggcggatgaagcgtttagatttcgccgaggcgcagaaa
gagcaggtccgcctcgtccataccgatgaccactggcataaggtgcaggggacagaaact
ttcacggacgagtatatccaggagacgaagaactattacgaccatctgtcgctgtacgtg
tgccgggaaactgggcactgcgctcgtctctcgtgtggtggagtcatccaggcgtgtcgc
tcggtgtgcgagggcgaagtccggaacgcattcgcgatcgtgcgaccacccggtcaccac
gccgagccagacgagcacatgggcttctgcttcttcaacaacgttgccgtcgcggcacgt
gaggtgcagcgccaggggttggcgaagaaggtgctcatcctcgattgggacgtacaccac
ggcaacgggacgcaacgcgcattctgggacgacccgaatgtgctgtacatctcgatccac
cggcacgacggcggcaaattctacccgtcgagcgactttggtgcactcgacatggtcggc
gagggggaaggagaaggcacgtcggtcaacatcccgtggcctgggccaggttttggcgac
ggcgactacatctacgcgttccagaagatcgtgatgcccatcgcgtacgagttcgcaccc
gaccttgtaatcatttcagctgggttcgacgctgcagacggggatcagctcggctgttgc
aacgtcacccctgctgggtacggccacatgacgcacatgctgtgcgctctcgcaggaggg
aaggtcgtcgtcgcactggagggaggttacaatcttcgtgccatctccgattcgtcctta
gcggtcgcccaagttcttcttggtgagacgcccgccgagatcgggcaagtccaggcttcc
gaattggcgaccgaggtcatacacgaggtcgcaaaggtccagtcgaagtactggaagaac
gtcaacgcagcggcgtgcgcacctcctgagatcggcaagggcggtggcgaatacgtcaca
acagtgcccgaccttctcaagcagcaccgtctgcagcacatgtacaccaagcacaagctc
ttcaccgtgcctctcgcaaacaccgacctgcatgagtggttccagaaccaggtcctcgtc
aacgaggggctgtacgaatccgagaccgaaaccctcgtcatcttcgcgcacgactttggg
aacctgcgtgttgagacagatggcgtggcgtcggtcgatgtcagccttgccaacagctat
ctgctcgacacgtctgacgccgtggtcgactgggtcagaggccggggttggaacctcatc
gacatcaatgtgctgcgcaacctgcgcagtcaatttgcgaagggtccacgcatggtgtca
aacagcggtgacaagatggacggccagctcatgcgctacctgtgggacaactacgtcgaa
ttgtcatcagccaagaacgttgtgctcatcggacatgggacagcttgtggagcggtcatg
gagctcgtcaaccacagggacgtacagtcaaaggtcaaggcgatcgtgcaggtggcgggt
atgcactcgattgtgcgaccagacccgacgaacgagaaccgtcgcacgtggttcagggac
gtctgccaaatatacctgccgcacattcacccgttgcttggagaggagcgcctgtataga
cgtatagggggacagctgcgaacggcccgcaaggccaaggttgttgacgtgctcgtggag
gcgctgcctgagatcaaggagtttgttgatagcaagctggacccagtgcagaccaacggg
cacgcaatagtcgacgttgtgtag
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