Cutaneotrichosporon cavernicola: CcaHIS019_0508710
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Entry
CcaHIS019_0508710 CDS
T09540
Symbol
cbc1, CcaverHIS019_0508710
Name
(RefSeq) uncharacterized protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03013
Nucleocytoplasmic transport
ccac03015
mRNA surveillance pathway
ccac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CcaHIS019_0508710 (cbc1)
09122 Translation
03013 Nucleocytoplasmic transport
CcaHIS019_0508710 (cbc1)
03015 mRNA surveillance pathway
CcaHIS019_0508710 (cbc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0508710 (cbc1)
03041 Spliceosome [BR:
ccac03041
]
CcaHIS019_0508710 (cbc1)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
CcaHIS019_0508710 (cbc1)
Spliceosome [BR:
ccac03041
]
Common components
Common spliceosomal components
Cap binding complex
CcaHIS019_0508710 (cbc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
Motif
Other DBs
NCBI-GeneID:
85497113
NCBI-ProteinID:
XP_060458508
UniProt:
A0AA48QXD2
LinkDB
All DBs
Position
5:complement(join(2168327..2170159,2170194..2170349,2170395..2170550,2170585..2170964,2171144..2171165))
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AA seq
848 aa
AA seq
DB search
MSYNGFSDDRGRGQRGSGRTAPETTAVRMRKMIFKHADDEDFDSIEDPPRLAKVLRRGWR
EGAPGIMDGFRYGVTEMPFKQAHYVTLLLHLSYRVEGEEEEQEETDCGREILEELARSFR
ASVEAREWLNARLLLQFLSLLVPAGLVEPRSLVDAYKSLLSVLNEVGGGGDRAERAARAV
GEGIIRSAHALAGSFAEDLESIVRTIEMFVTGRKGTRSLVNPLAPILAEGEEPEAYADPL
SHLMTALLELRASEWQAPAILPRPSENAVIPEGATMPDPYAISPVYMPPEMYDVDEENPQ
DCEGRTSGLVLFNESVVPPTNTILGWTLRSLLLDTLNIFEVNRKECARFLLNISRYLAPG
TFKSEESESTYSLESSVVSTIISTLCTLPNAPHSPLMYGSVITELCKLSPATIAPPVGRA
VRRIFTQLGEDGLDIEISRRVSDWFAIHLSNFGFQWMWKEWIPDLELPAAHPRRAFMRRV
VEQEIRLAYHDRILQTLPEPMLAKDAEVVSPEAPDPVWQYEAAGSDLHAEASDLLRRMKN
KAPSHEVKNFITDLPDAMDQGGDSLLRASIVKMVTETILKLGDRSFSHFLNATERYLDVL
RFITNDYASRRVVLDAIVSFWRRSSQMRLITIDKYLQYSILEPLDVVDWVFAAEAGSDTV
PDGWTDVDKWEVLRMALDKIVGRVVRERRRLRAVDKADEVARARRAAERLERGEGVGMDD
GDDDPDRSREAQEVQSQVDVQTDRLERVFSATVQRFAEELLPWAYGREGAGLKSVLALLD
AGDSGAWPMRARWGWWREFVRSYAQLIEPLADSIETEVFAIIPPHSAGLEARSEAMVRGV
WADALGRE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgagctataacggctttagcgacgaccgcgggcgcggacaacgcggcagtgggcgcact
gctcccgaaacgactgctgtacggatgcgcaagatgatcttcaagcatgccgacgacgag
gactttgacagtatcgaggaccctccgcgtctcgccaaggtcctgcgccgcggatggcgc
gagggcgcacccggtatcatggatgggttccggtacggtgtcactgagatgccgttcaag
caggcacactacgttactctgctattgcacctctcgtaccgcgtcgagggggaggaggag
gagcaggaggagaccgactgcgggcgcgagatcctcgaggaacttgcgcggtcgttccgc
gccagtgttgaggcgcgcgagtggcttaatgctcgtctcttgctccagttcctctcactt
ctcgtgcccgctggcttggtcgaaccccgctccctcgtggacgcgtacaagagcctcttg
agcgttctgaacgaggtcggtggtggcggcgaccgtgctgagcgcgccgcgcgcgctgtt
ggcgagggcatcatccggtccgctcacgcgctcgctggctcgtttgccgaggacctcgag
agcatcgtcaggaccatcgagatgttcgttacgggccgcaagggaacgcgctcactcgtt
aaccccctcgcgcctatcctggccgagggcgaggaaccggaggcgtacgccgaccccctc
tcccacctcatgaccgcgctcctcgagcttcgcgccagcgagtggcaggcacctgctatt
ctccctcgcccgtcagagaacgccgtcatccccgaaggcgcgacaatgccggacccatac
gccatctcgccagtttacatgccacccgagatgtacgacgtcgacgaagagaacccgcag
gactgcgagggccgtactagcggtctcgttctgttcaacgagagcgttgttcccccaacg
aacacgatcctcggctggaccctccgctccctcctcctcgacacgctcaacatcttcgag
gtcaaccgcaaggagtgcgcgcgcttcctcctcaacatctcccgctacctcgcaccggga
acgttcaagtctgaggaatcagagtcgacgtactctctcgagtcgtcggtcgtgagcacc
atcatctccactctctgcacccttcccaacgcgcctcacagtccgctcatgtacggctcg
gttatcaccgagctgtgcaaactgagcccggccactatcgcgccgccagtaggccgcgct
gtgcggcgaatcttcacccagctcggcgaggacggcctcgatatcgagatatctcgccga
gtttctgactggttcgctatccacttatccaatttcgggttccagtggatgtggaaggag
tggattcccgaccttgagctccctgccgcgcacccgcggcgagcgttcatgcggcgagtg
gtcgagcaggagatccgcctcgcgtaccacgaccgcatcctccagacgctccccgagccc
atgctcgccaaggacgccgaggtcgtgtcgccagaagcgccggatccggtgtggcagtac
gaggccgccggcagcgacttgcacgctgaggcttccgacctcctgaggcggatgaagaac
aaggcaccctcgcacgaggtcaagaactttatcaccgaccttccggatgccatggaccaa
ggcggtgactccctcctccgtgcatctattgtgaagatggtcaccgaaaccatcctcaag
cttggtgaccgctccttctcccatttcctcaacgcaaccgagcgttacctggatgttttg
cgcttcatcacgaacgactacgcctcgcgtcgtgtcgtgctcgacgcaatcgtgtccttc
tggcgccgctcgtcccagatgcgtctcatcaccatcgacaagtacctccagtacagtatc
ctcgagccgctcgacgtcgtcgactgggtgttcgccgccgaggcgggcagcgacaccgtg
ccggacggctggaccgacgtggacaagtgggaggtcctgcgtatggcgcttgacaagatc
gtcggccgcgttgtgcgcgagcgacgccgcctccgcgccgtcgacaaggcggacgaggtt
gcgcgtgcccgtcgcgccgccgagcgcctcgagcgcggcgaaggtgttggcatggacgac
ggggatgatgacccggaccgttcccgcgaggcgcaggaggtgcagagccaggtcgatgtg
cagacggaccgtctcgagcgcgtgttcagcgccactgtccagcgttttgccgaggagctc
ctcccatgggcatacggccgcgagggtgccggcctcaagtcggtcctcgccctcctcgat
gccggcgacagcggagcgtggcccatgcgcgctcgctggggatggtggcgcgagtttgtg
cgaagctacgcccagctcatcgagccgcttgccgactcgatcgagactgaagtcttcgcg
atcattcccccacactcggcgggcctcgaggctcgctcagaggccatggtgcgcggtgtg
tgggccgacgcgctcgggcgcgagtag
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