Cutaneotrichosporon cavernicola: CcaHIS019_0508930
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Entry
CcaHIS019_0508930 CDS
T09540
Symbol
CcaverHIS019_0508930
Name
(RefSeq) uncharacterized protein
KO
K15174
RNA polymerase II-associated factor 1
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
CcaHIS019_0508930 (CcaverHIS019_0508930)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccac03021
]
CcaHIS019_0508930 (CcaverHIS019_0508930)
Transcription machinery [BR:
ccac03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
CcaHIS019_0508930 (CcaverHIS019_0508930)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
85497135
NCBI-ProteinID:
XP_060458530
UniProt:
A0AA48L7B9
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All DBs
Position
5:complement(join(2231324..2232031,2232069..2232201,2232234..2232656,2232692..2232708))
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AA seq
426 aa
AA seq
DB search
MSKKSSKLDLLVRVRFENPLPDPPFPPKLLKVKTDISRLGDPAYLDQLAGAAPAPMLLDA
EMGMPIDLNTFDGVWDGNDASLNPTLETVKLDPGDAALLAPLRIFAKTANGAPAPSSIKP
EVSWMRNSSYIQRRETTRRRAAAEAVQEEEVDASEAAQIMAIEKSFQDLRDQELAEIRHP
HPKRKHLRVVESYDVLPDDDTWSSSYILLRFPERPSAATAQNPSAKASRGCLDRALLRPV
VEEDQALIDFFLPKESDLSRLTSLEEHPIDSETAAEAVELSAEGNDEKVDEMFPNVTYER
IRTYEVVSQMVPDREFLLTISEEAAEDETEEEDMFGDDEPKPKKRKGAFYKPISMRSQLR
KTLQKTRTDTPWDKVRLGFREPAATEIEEREKMARSVNDSTWVEDQTDEGHDSFAATLRE
ANAEID
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaagtcctcaaagctggacctccttgtgagggtccgcttcgagaacccactc
ccggacccgcccttcccgccaaagctcctcaaggtcaagacggacatctcgcgcctcggc
gacccggcctacctcgaccagctggcgggcgcagcgccggcgccgatgctgctcgacgcc
gagatgggcatgccgatcgacttgaacacctttgatggcgtgtgggacggcaacgatgca
agcctgaaccccaccctcgagaccgtcaagctcgacccgggagacgcggcgctcctggcg
ccgctgcgcatcttcgccaagacggccaacggtgcgccggcaccaagctcaatcaagccc
gaggtctcgtggatgcgtaactcatcctacattcagcgccgggagacgacccgccgccgc
gctgccgccgaggctgtccaagaggaggaggtggacgcgagcgaggcggcgcagatcatg
gccatcgaaaagtcattccaggatctgcgcgaccaggagcttgccgagatccgccacccg
caccccaagcgcaagcatctgcgcgttgtcgagtcctacgacgtgctgcccgacgacgac
acgtggagcagctcgtatatattgctcaggtttcccgagcgcccgtcggcagcgacggcg
cagaacccgtccgccaaagcgtcgcgcgggtgcctcgatcgcgcgctgctccgccccgtt
gtcgaggaggaccaggcgttgatcgatttcttcttacccaaggagtcggacctgtcgcgc
ctgacgtcgttggaggagcaccctatcgacagcgagacggctgccgaggccgtcgagctc
tcggccgagggcaacgacgagaaggtcgacgagatgttccccaacgtcacatatgagagg
atacgcacatacgaggtcgtgtcgcagatggttcctgaccgcgagttcctgctcacaatc
tcggaagaggccgccgaggacgagaccgaagaggaggacatgttcggcgacgacgagcca
aagcccaagaagcgcaagggcgcgttctacaagcccatctcgatgcgctcgcagttgcga
aagacgctccagaagacaaggacagacacgccgtgggacaaggtccggcttggattccgt
gagccggctgcaacagagattgaggagcgtgagaagatggctaggtccgtcaacgactct
acatgggtcgaggaccaaaccgatgaggggcacgactcgtttgctgccacgctccgggag
gccaatgccgagattgactag
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