Cutaneotrichosporon cavernicola: CcaHIS019_0509770
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Entry
CcaHIS019_0509770 CDS
T09540
Symbol
POP1, CcaverHIS019_0509770
Name
(RefSeq) uncharacterized protein
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CcaHIS019_0509770 (POP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccac03009
]
CcaHIS019_0509770 (POP1)
03016 Transfer RNA biogenesis [BR:
ccac03016
]
CcaHIS019_0509770 (POP1)
03029 Mitochondrial biogenesis [BR:
ccac03029
]
CcaHIS019_0509770 (POP1)
Enzymes [BR:
ccac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
CcaHIS019_0509770 (POP1)
Ribosome biogenesis [BR:
ccac03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
CcaHIS019_0509770 (POP1)
Transfer RNA biogenesis [BR:
ccac03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
CcaHIS019_0509770 (POP1)
Mitochondrial biogenesis [BR:
ccac03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
CcaHIS019_0509770 (POP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_N
POPLD
POP1_C
GCV_T_C
Motif
Other DBs
NCBI-GeneID:
85497219
NCBI-ProteinID:
XP_060458614
UniProt:
A0AA48L7C8
LinkDB
All DBs
Position
5:complement(join(2460561..2461160,2461197..2461773,2461807..2462467,2462502..2462775,2462811..2462857,2462901..2463066))
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AA seq
774 aa
AA seq
DB search
MAPKQQSNFGLSNGAKKPMRSIQKTEDLLKHNVHAKRRGQGKERGVLKGLHDLVKTSNNL
PGFVSVERFAETRALEIAAMQNAIKAASAFCSSRAFQSLPRHLRRRAASHNPRRVPKRLR
SRAAAEIDPGDMTDKIHRKKAKLRARGDLRGRSRTLQLRARQVHKRWLGSHIFHAKRFHM
ANIWGYRLGMTPTLKGFRAAYRAARRRAIMQDTSFVGVIELQGTQKDIIALLSKVSAGTF
TGNKYDGGMRVAHISAYHFGTFPLGLIGPVDVLWQPAREDKGRTVWLRVHPSIFDEVWET
MTTAISAHSDEFGALLVHDLRDTLESFEITGPLAGQVLSRSMRICNSEPEDKKRALASLL
HGDPAECPDGMIVGFKVYDPRLSYPPARIQETPTLIQSPWETLQTPKGVSTELWDADVRT
PLSKPRWKKSDLDARRHQLDVPGTRLSATVNDDRVPVILIKNTVQSQTPGQEASGFHSWT
LLIPHGWSMAFLPSFVYCNARLAGVVERRNRCREAGVPSFPEHYSSVCHASDAWEAQQSQ
VDQVRWLRKPPGKRPEFSVLGTRWPFRPVWAEVLGDAGVTSAEETATNGQAELRTWLFNP
ALAPCVATLVAAEDPAVRLLECVNVFRQRRGMSQLPLSATQELFTSALCQVQVEMIGRGS
PSDMATITELDAAERNIWLNAHAQDQNTAVQHSGASELLKLGEEHSDKGVIGFVTTGNIS
LTRGEGHGLGMVSLAGYHRLLVAARQSPQPELAVVKIKNRDGHIFRLASLTLVQ
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaaacagcagagtaattttgggctatcgaacggtgcaaagaagcccatgcgg
agcatccagaagaccgaggacctactcaagcacaatgtgcatgcaaagcggcggggtcaa
gggaaggaacggggcgtgctgaaaggcctccacgacctggtaaagacgtcgaacaaccta
cccggatttgtctctgtcgagcggtttgcagagacacgcgctctggaaatcgccgccatg
cagaacgcaatcaaggctgcttctgcgttctgctcatcgcgcgctttccaatcgcttccg
aggcacctgcgtcgccgcgcagctagtcataatccgcgccgcgtgccgaaacgtctgcgg
agccgcgctgccgccgagattgaccctggagatatgacagacaaaatccaccgcaagaag
gccaagctgcgcgcacgcggagacctgcgaggacgcagtcgcacgctccaattgcgcgcg
cgacaggtacacaaacgctggctggggtcgcatatcttccacgcgaagcgattccacatg
gctaacatctggggttatcgcctgggaatgaccccgacgcttaagggcttccgcgcggca
taccgtgccgcgcgtcggcgcgcgatcatgcaggatactagcttcgtgggagttatagag
ctgcagggcactcagaaggacatcatcgcccttctctcaaaagtctcggcggggacgttc
acgggcaataaatacgatggagggatgcgcgtggcccatatctccgcctatcattttggc
acgttccctctaggtctcatcggcccggtggacgtattgtggcagcctgccagggaggac
aaaggccgcactgtctggctgcgggtgcacccctccatctttgacgaggtgtgggagacg
atgacgactgcgatttcggcacactcagacgagttcggggcccttcttgttcacgacctg
cgtgacacactcgagtctttcgagatcactgggcccctggcaggacaggtactcagccgt
tcgatgcggatctgcaactccgagcccgaggacaagaagcgcgctcttgcgtctctcctt
cacggggacccggccgagtgcccagacgggatgatcgtgggcttcaaggtgtacgaccct
cggttgtcttatcctcctgcgcgcatacaagagacccccaccttgatccagtccccctgg
gagactctccagactcctaagggagtgtcaacggagctgtgggatgccgatgtgcgcaca
ccgctttcgaagccgcggtggaaaaagtcagatctcgacgcgcgccggcaccagctcgac
gtgccaggtactcggctctccgcaacagtaaacgacgatcgtgtgcctgttattctcatt
aagaacactgtgcagagccagaccccaggacaagaggcttcgggcttccatagctggaca
ctcctcatcccgcatgggtggtcgatggcgttcctcccgtcgtttgtctactgcaacgct
cgcttggctggtgttgtggagcgccgcaaccggtgccgcgaggctggagttccctcattc
cccgaacactactcgtcggtctgtcacgcgtctgacgcgtgggaggcgcaacaatctcag
gtagaccaggtgcgctggctccgcaagccgccaggtaaacgtcccgagttctcggtgtta
gggacccggtggcccttccgcccagtgtgggctgaggtgctgggggatgctggagtgacc
tcggctgaggaaactgccacgaatggtcaagccgagctccgaacatggctgtttaacccc
gcccttgcgccttgcgtcgcaactctcgtcgcggccgaggacccggctgttcgccttctg
gagtgcgtgaacgtcttccgacagcgtcgcggaatgtcgcagctgccactgtccgccacg
caagagctcttcaccagcgctctctgccaggttcaggttgagatgatcgggcgcggctcg
ccatccgacatggcgacgatcaccgagctcgacgcggctgagcggaacatttggcttaac
gcccacgcccaggaccagaatacggcagtacagcatagcggcgcgagcgagctgctgaag
ctgggcgaggagcacagcgacaagggtgtgatcggctttgtgacaaccggcaacatctcg
ctcactcgcggcgagggacatggacttggtatggtttcactggccggttaccaccgcctc
ctggttgctgcgcgtcagtccccacaaccagagctcgcagtcgtcaagattaaaaaccgc
gacggacacatcttccgcctcgcgtcgctcaccctcgtccagtga
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