Cutaneotrichosporon cavernicola: CcaHIS019_0600580
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Entry
CcaHIS019_0600580 CDS
T09540
Symbol
CDC36, CcaverHIS019_0600580
Name
(RefSeq) uncharacterized protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CcaHIS019_0600580 (CDC36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0600580 (CDC36)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CcaHIS019_0600580 (CDC36)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CcaHIS019_0600580 (CDC36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
85497469
NCBI-ProteinID:
XP_060458864
UniProt:
A0AA48QXI5
LinkDB
All DBs
Position
6:join(137625..137650,137693..137766,137921..137950,138002..138202,138349..138623,138661..139007,139061..139619)
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AA seq
503 aa
AA seq
DB search
MPPQRGSLQPTSTLFTSTTTIITSPLYIQLYHPNTMNRAGGLLGQPRQSTVPPGYRAAQP
TAGGANGMFYGGPAMQNRGTGLMGQGALGGFPPSSGLGRSGPPGISGRGADPNDFPALGS
HNQHGNNSTYASQAQPSQGGSSHLQQQMYNLHIGQGQGQMDSMAPPPPPGLSGPTSSSNQ
PNGAGEGLRDDFPALGVGEKERMAGVLKIGGGSNQPSSPQQSLNGPGSSHSATPANMGQG
PPSATGESWTRQSPTRTDPLLRQQVQHPVQQILSSPVDKWGLKALLHQIRQHMGKDDRGM
LMFGEDLVDLGVDVSSAEPLYQSFVTPWAEPSQSQQLQIEDMFVIPGCYHVVPPPVESKM
SNFSEETLFFQFYSAPQDMLQLMAAEELYNRGWRFNMEARVWMTSPLLSQIDMHGDLSQH
PPVVRGNLTVFEPSSFTKRDTRELPGGEEYPVELVHLEATRRASEIATEQAKPRKDSVRS
PEDNNSSLLASNTQHFQNMAVAH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgccaccccaacgtggttcactacagccaacatcaacactcttcacatccacaacaaca
atcatcacatcccccctctacatccagctctaccacccaaacacaatgaatcgagcagga
ggtttgttgggacaaccacggcaatctacggtaccgccaggataccgcgccgcgcagccg
actgctggcggtgccaatggcatgttctacggcgggcccgcgatgcagaaccgtgggact
ggcctcatggggcagggcgcgctcggcggcttccccccatccagtggccttggacgcagc
ggaccaccaggaattagtggacgaggagcggatccaaacgactttcccgcactcggaagc
cataaccagcacggcaacaactcgacatacgcgtctcaagcccagcccagccaaggcgga
tcaagtcacctgcagcagcagatgtacaacctgcacatcggacaaggacagggacaaatg
gactcgatggcgcctccaccgccgccaggtctgtctggacccacaagctcgtcaaaccag
ccgaatggtgcgggagaagggttgcgagacgacttccccgcattgggagtgggcgagaag
gagagaatggctggtgtgcttaagattggaggaggatcaaaccaacccagctcgccacag
cagtcactcaacggccccggctcgtcccattctgcaacccccgcaaacatgggccagggg
ccaccatccgcgacgggagagtcgtggacaaggcagtcaccaacgcgtaccgatccgcta
ctgcggcagcaggtccagcatcccgttcagcagatcttgtcgtcgcctgtcgacaagtgg
ggcctcaaggcgctcctgcaccagatccgtcaacatatgggcaaggacgaccgcggcatg
ctcatgttcggcgaggacctcgtcgacctaggggttgatgtgtcaagcgcagaaccttta
taccagtcgtttgtgacgccatgggctgagccgagtcaatcgcagcagctgcaaatcgag
gacatgttcgtcatcccgggctgctaccacgtcgtgccgccaccagtcgagagcaagatg
tccaatttctccgaggagacgctcttcttccagttctactcggcaccgcaggacatgctc
cagctcatggctgccgaggagctctacaatcgcggctggcgcttcaacatggaggcgcgc
gtctggatgacctcgcctctgctctcgcagatcgacatgcacggtgacctgtcccagcac
cctccggtcgtgcgcggcaacttaaccgtcttcgaaccgtcgtccttcaccaagcgcgac
acgcgcgagctcccaggcggcgaggagtaccccgtcgagctcgtccatttggaggcgacg
cgccgcgcgtccgagattgccactgaacaggccaagccgcgcaaggactctgtccggtcc
cccgaagacaacaactcgagcctgctggcctcgaacacccagcacttccagaacatggcg
gtggcgcactag
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