KEGG   Cutaneotrichosporon cavernicola: CcaHIS019_0600950
Entry
CcaHIS019_0600950 CDS       T09540                                 
Symbol
rfc1, CcaverHIS019_0600950
Name
(RefSeq) uncharacterized protein
  KO
K10754  replication factor C subunit 1
Organism
ccac  Cutaneotrichosporon cavernicola
Pathway
ccac03030  DNA replication
ccac03410  Base excision repair
ccac03420  Nucleotide excision repair
ccac03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CcaHIS019_0600950 (rfc1)
   03410 Base excision repair
    CcaHIS019_0600950 (rfc1)
   03420 Nucleotide excision repair
    CcaHIS019_0600950 (rfc1)
   03430 Mismatch repair
    CcaHIS019_0600950 (rfc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccac03032]
    CcaHIS019_0600950 (rfc1)
   03400 DNA repair and recombination proteins [BR:ccac03400]
    CcaHIS019_0600950 (rfc1)
DNA replication proteins [BR:ccac03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    CcaHIS019_0600950 (rfc1)
DNA repair and recombination proteins [BR:ccac03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     CcaHIS019_0600950 (rfc1)
SSDB
Motif
Pfam: RFC1 BRCT AAA Rad17 AAA_30 nSTAND3 AAA_22 RuvB_N AAA_16 AAA_assoc_2 AAA_33 AAA_5 AAA_18 AAA_14 NTPase_1 DUF4719 AAA_28
Other DBs
NCBI-GeneID: 85497506
NCBI-ProteinID: XP_060458901
UniProt: A0AA48L7Q4
LinkDB
Position
6:join(250004..250132,250168..250255,250287..250323,250364..250369,250406..250475,250512..250957,250990..251157,251194..251490,251528..251644,251679..252087,252123..252208,252327..252464,252508..252664,252788..253537)
AA seq 965 aa
MPVTPRKSNTQGSQKDSSQDKDRPKKAAPKKPTAPAGSDLRGWFKPGTSTPSRPKEEVKP
KAKGTGDEPIMIDESDDEVPVKKPASRAPPKPEPSKAATTSKHFPTASSSKRPIAVESSP
EPELEPVKVQPKRSTPRAAKTAAKRNNLVESSDEDDIKPKRRTPAKRVATESEDEGRPPK
KVRGKEAPAVRDSDEEMSEEDVKPKTAAPKKALAKKPPAKKPVAKAAPAKKPASKDKGKD
EDVEDGKDDKDEKPKPKFNFHAMAARRAAGPAAPGSKQIPDGDPAALAGLCFVFTGELES
LGRDDAIELCKRYHGRVVGTPSGKTDYVIVGENAGASKIAKIKEKGIKTLTEDEFLDLIR
TRKGVLDDKQQKALEKKEQEVIKNAEEMARREEEEEKHRKRKEKALAGTGLAAKKAAPAS
AQLWTTKYAPKTIKEVCGNKSNIEKLQTWLANWQKSYNSGFKKPGKDGSGLYRAVLISGP
PGIGKTTSAHLVAKESGYSPLELNASDTRSKKLLENGTNVDNTSLDGFFQGKGVRVRCND
VEMLKFQSTTVTDLNLSKRTCLIMDEVDGMSAGDRGGVGALNALIKKTKIPLILICNDRN
LPKMKPLWGTTFSLAYRREKLKIPANVVDELVKGANSDIRQVLNMLSTYKLGKSEMDFDE
GKELIKMNEKNTIMTPFTITDKLCGPYSFARTSKETLNDKMDLYFQDFSFVPLFIQAADS
ISDGDLVDRLIHGGEQHWSLLPLHAVTSTVRPAYHIYGMNRPTGGSGWGGPSFPQWLGQN
SKMGKLQRELTDIQIRMRLRVSGSRDEIRQQYMPLLAGKIVKPLMDEGSEAIDGTIETMD
EYYLGKDDWDAFVELGVGDMSEEKVLKMIPSATKASFTRTYNKRDHPIAFHKGDMFAASR
KKVAAEGEQPDNDAVFEDDAPPPDDEDDKKAEDEVNDVSKDKLIKAVGKGKGKAAAGKKA
AAKKK
NT seq 2898 nt   +upstreamnt  +downstreamnt
atgccggtaacaccacggaaatccaacacccaggggagtcagaaggactcgtcgcaggac
aaggacaggcccaagaaggctgcacctaagaagcccaccgcaccggctggcagcgatctg
cgaggatggttcaagcctgggacatcgacgccgtctaggcccaaagaggaggtcaagccc
aaggctaaggggactggtgatgagccgatcatgattgatgagagcgatgatgaggttccg
gtgaagaagccagcgtcacgggcgccacccaagccggaacccagcaaggctgcgacaacc
agcaagcacttcccaactgcctcaagctcgaagcgacccatcgccgtggaatccagtcca
gagccagagctggagccggtaaaggtgcaacccaaaaggtctacccctagagctgcgaag
acggccgccaagcgcaacaacctcgtcgagtcctctgacgaagatgacatcaagccgaag
cgccgtacacctgccaaacgagtggcaaccgagagtgaagacgaaggccgtccaccgaag
aaggtgcgggggaaggaggctccggctgtacgcgacagtgacgaggagatgagtgaggaa
gacgtcaagccgaagacggctgctcccaagaaggcactggcgaagaagcctcccgccaag
aagccagttgccaaggctgcgccggccaagaagcctgccagcaaggacaaaggaaaggac
gaggacgttgaggacggcaaggacgacaaggacgaaaaacccaagcccaagttcaacttc
catgccatggcggctcggcgagccgctggcccagccgccccggggtccaagcagattcct
gacggcgacccagctgcgttggctggcctctgcttcgtgttcaccggcgagttggagtcg
ctggggcgtgacgacgccatcgagctttgcaaacgctatcatggacgcgtggtcgggaca
ccatctggcaagaccgactatgtaatcgttggcgagaacgcaggcgcgtccaagatcgct
aagatcaaggaaaagggcatcaagacgctcacagaggacgagttcctggacctcatccgc
acgcgcaagggcgtacttgatgacaagcagcagaaggcgctcgagaagaaggagcaggag
gtgattaagaatgccgaggaaatggccaggcgtgaggaggaggaagagaagcaccggaaa
cgcaaggagaaggctctggctgggacaggcctggcagctaagaaggctgcccctgcttca
gcgcagttgtggaccacgaagtacgcgcccaagaccatcaaggaggtttgcggcaacaag
tcgaacattgagaagctgcagacgtggcttgccaactggcagaagagctacaactcgggc
ttcaagaagcctggcaaggacggcagcgggctctaccgcgccgttctcatatcgggcccg
ccaggtattggcaagacgacgtcagcccacctcgtcgcgaaggagtcgggttactcacca
ctcgagctcaacgcaagtgacacacgcagcaagaagctccttgagaacggcaccaacgtt
gacaacacgtctctcgacggcttcttccagggcaagggcgttagggttcgttgcaatgac
gtggagatgctaaagttccagagtacgaccgttaccgacctcaacttgagcaagcgcaca
tgcctcatcatggacgaggtcgacggcatgtcagccggcgaccgcggcggtgtgggcgcg
ctcaacgcgctaatcaagaagacgaagatccccctcatcctcatctgcaacgaccggaac
ctccccaagatgaagccgctctgggggacaacgttcagcctcgcgtacaggcgggagaag
ctcaagatccccgccaacgttgttgatgagctcgtcaagggtgccaactccgatatccgc
caagtgctcaacatgctctcgacgtacaagctcggcaagagcgagatggactttgacgag
ggcaaggagctgatcaagatgaacgagaagaatacgatcatgaccccgttcaccatcact
gataagctctgcgggccgtactcgttcgcccgtacgagcaaggagacgctcaacgacaag
atggacctgtactttcaagacttctcgttcgtccccctgttcatccaggctgcagactcg
atttctgacggcgaccttgtcgaccgcctcatccacggcggcgagcagcactggtctctc
ctcccattgcacgctgtcacctcgactgtgcgaccagcctatcacatctacggaatgaac
cgcccgaccgggggaagtgggtggggcggaccctccttcccacagtggctgggtcagaac
tcgaagatgggcaagctgcagcgcgagctaaccgacatccagatccgtatgcgcttgaga
gtctcaggatcacgtgatgagatccgacagcagtatatgccgttgctggctggcaagatc
gtcaaaccgctgatggacgaggggtccgaggcgatcgacggaacgatcgagacgatggac
gagtactacctcggcaaggatgactgggacgcgttcgtcgagctcggcgtcggcgacatg
tctgaggagaaggtgctcaagatgatcccctcagcgacaaaggcttcgtttacgcgcaca
tacaacaagcgcgaccaccctatcgcattccacaagggcgacatgtttgcagcctcgcgc
aagaaggttgctgctgaaggggaacagccagacaacgacgccgtgttcgaggacgacgcg
cctccacctgacgacgaggatgacaagaaggctgaggacgaggtcaacgacgtgagcaag
gacaagctcatcaaggctgttggtaagggcaagggcaaggctgctgcaggcaagaaggcg
gccgcaaagaagaagtag

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