Cutaneotrichosporon cavernicola: CcaHIS019_0602600
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Entry
CcaHIS019_0602600 CDS
T09540
Symbol
mlh1, CcaverHIS019_0602600
Name
(RefSeq) uncharacterized protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03430
Mismatch repair
ccac03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CcaHIS019_0602600 (mlh1)
03460 Fanconi anemia pathway
CcaHIS019_0602600 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccac03400
]
CcaHIS019_0602600 (mlh1)
DNA repair and recombination proteins [BR:
ccac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
CcaHIS019_0602600 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
85497671
NCBI-ProteinID:
XP_060459066
UniProt:
A0AA48L806
LinkDB
All DBs
Position
6:join(656522..656611,656670..656807,656841..657429,657466..657713,657760..658196,658229..658382,658415..658819)
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AA seq
686 aa
AA seq
DB search
MDVDSDVGPAGPGAGPRARPNPIRKLASDVIIHRPSNAVKELVENALDAGSTSIKVTVKD
GGLKLLQISDNGHGVNRADLALLCERYATSKLAAFEDLQTIATYGFRGEALASISYCAHL
EVVTKTQTDTCGWKAQYSDGELKSEPRPTAANDGTTVSAEDMFYNMPLRRRAFRSASDEY
ARILDVVSKYAVHNPHAGWVCKKAGSALADVSTPAGSNAKANIGLLYTPALAAELLQVPE
TEFPNLGAKVRGWVSNANSNWARKGGWLLFINNRLVDSSKIKKAIDGLYTAYLAKGASPF
VYLSLELDPKTVDVNVHPTKSEVHFLREDEVIDAVVGAVDKALAHANTSRSFTVQTLLPG
ADTFVQRDAATRPKPAPNYKVRMDPANRTLDSMITVVAPSQISGYDERPTKRRNVDPSAD
VQLVDETPMWNAPKDDQEVGESVCEFTSIDELRRAVHKRASPDLTETIAKHAFVGLVDRV
MCLALIQHQTRLLLVNHAAMGDEHFYQLGLRQFGALGRLQLEPAPALSDLLRLAAEDEPL
ADHRLGVDEVVDKCTALLMSKADMVDEYFSLSLADGKVSSLPLLLKGYTPNLDRLPHLLL
CLATRVDWDDEKECFEGVLREIAFFYSPRPFDEDEEEDPDEAAHQAWQLEHVLFPSFRRT
QWPRTMSTDVSQVANLPDLFRVFERC
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgacagcgacgttggccccgctggccctggcgctggccctcgagctcgcccc
aacccgatccgcaaactggccagcgacgtcattatccaccgcccctcgaacgccgtcaag
gaactagtggagaatgcgctcgatgccggatcgaccagtatcaaagtgacggtcaaggac
ggagggctcaagctcctccaaatctccgacaacggtcatggcgtcaatcgcgccgacctc
gccctactgtgtgagcggtacgcgacgtcgaaactcgcggcatttgaggatctacagacc
attgcgacgtatgggtttcgcggcgaggcactggccagtatctcgtactgtgcccatctg
gaggtagtgaccaagactcaaacggatacgtgtggatggaaggcacagtattcggatgga
gaactgaagagtgaaccgcggccgacggccgctaatgacggaacgacggttagtgccgag
gacatgttttacaatatgcctctgaggcggcgggcgttccggtccgcgtcggacgagtat
gcgcggatcctcgatgtcgtgagtaagtatgcggtgcataatccccacgctggatgggta
tgcaagaaggctggcagcgctctggccgacgtgagcactccagctgggagtaatgcgaaa
gcaaatatcggactgctgtatacacctgccctcgcggcagagttgttgcaagttcccgag
accgagtttcccaatctcggagcaaaggttagggggtgggttagtaatgccaattccaac
tgggcgcgtaaaggcggatggctcttgttcatcaacaatcgcctggttgacagctccaag
atcaaaaaggccattgacggactatacaccgcctaccttgccaaaggagcttcaccgttc
gtctacctctccctagaactggaccccaagactgtcgacgtcaatgtccaccccacaaag
tccgaggtccacttcctgcgcgaggacgaggtgattgacgcggtcgtcggtgcggtcgac
aaggccctcgcgcatgccaacacttcccgcagcttcaccgtacagacattgttgcctggg
gccgacacgtttgtccagcgcgatgcggcgacgcgtccaaaaccagccccaaactacaaa
gtacgcatggaccctgcgaaccgtaccctcgactcgatgataactgtcgtcgccccatcc
cagatttcgggatacgacgaacggccaaccaagcgacgtaatgtcgatccctcggccgac
gtgcaactcgtggatgaaacgccaatgtggaacgctccaaaggacgaccaagaggtcgga
gagagcgtgtgcgagtttacgtccatcgatgaactgcggcgcgccgtgcacaagcgcgcc
agtcctgatctgacggagacgatagccaagcacgctttcgtcggccttgtcgatcgcgtc
atgtgtctcgccctcatccagcaccagacgcgactactactagtcaaccacgctgccatg
ggtgacgaacacttttaccagctcggattgcggcaattcggtgctctgggtcgcttgcag
ctcgaacctgcgccggctctgtcagacctcctccgtttagcggcagaggatgagccgctg
gccgatcaccgacttggcgtcgacgaggttgttgataaatgcaccgctctcctcatgtca
aaggccgacatggtcgacgagtacttttccctctcgcttgcggacggcaaggtcagctca
ttgccgctcctgctcaaggggtatacgcccaacctcgaccggttgccacatctacttctg
tgcctcgcgacgcgggtggattgggacgacgagaaggagtgttttgagggcgtgttgcgc
gagatcgccttcttctactccccccggccctttgatgaggacgaggaagaggatccagac
gaggcggcgcaccaggcctggcagctcgagcatgtcctctttccctccttccggcggacc
cagtggccacggaccatgtccaccgacgtcagccaggtcgccaacctccccgacctcttc
cgtgttttcgagcgttgttag
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