Cutaneotrichosporon cavernicola: CcaHIS019_0603140
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Entry
CcaHIS019_0603140 CDS
T09540
Symbol
TAF5, CcaverHIS019_0603140
Name
(RefSeq) uncharacterized protein
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CcaHIS019_0603140 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccac03021
]
CcaHIS019_0603140 (TAF5)
03036 Chromosome and associated proteins [BR:
ccac03036
]
CcaHIS019_0603140 (TAF5)
Transcription machinery [BR:
ccac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CcaHIS019_0603140 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
CcaHIS019_0603140 (TAF5)
Chromosome and associated proteins [BR:
ccac03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
CcaHIS019_0603140 (TAF5)
STAGA complex
CcaHIS019_0603140 (TAF5)
TFTC complex
CcaHIS019_0603140 (TAF5)
SAGA complex
CcaHIS019_0603140 (TAF5)
SLIK complex
CcaHIS019_0603140 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
TFIID_NTD2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_SCAP
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SPT8
LisH
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
85497725
NCBI-ProteinID:
XP_060459120
UniProt:
A0AA48QY03
LinkDB
All DBs
Position
6:join(793848..794345,794377..794746,794777..795765,795799..796356)
Genome browser
AA seq
804 aa
AA seq
DB search
MSDSPAPAAGAAAGPARASAELLPSAVMEYLQQHGFDKALQALQTELQQTGGEKEADGEA
EPIANANLEAVFRAPGAIPLETMVKRNIPQATTVSVSTMSDRITPEFIAQSKYIIEKLQA
RLEEQADAEEGRASGMSQASFIDPSDRVEGYKRYRRWVSDGLDMWKFELDNVSFPLFAHT
FLDLIDFGFTEAAQKFYKDNCEHHRVSHSSELSYLAGINAPHQILLDPYCQRLRSERYQL
PMSRNSFALLVQWLSGSGLDEEWEAGLHSAPGRAKEAVRAIVHQRLDVKVSDSGMPVDKI
SIASASGLLAGLLPPATTADEFNGATQLKLGQPAMLDKLKEEVIRVVREEDEAVNGAPDT
PADSTINGYANGTDANGDVEMADARSPAKQVKLEPDADPDVVAPDPTETLPPQATFYKVT
DVKREVEAVRDKRKMIRLGASGEDSTGTSTTLPSIVAFTMFDGGENITSVEFSPDSSLIA
AGSAESTVRLWSSRGEKLKAKSLDSYGSIIEDEGMAMRKLVGHSGPVYSMSFDPISGSGG
PPHALLSSSQDGTVRLWSMDTYSNLAVYRGHGREAVWDVEWGPFGVYFASASRDRTARLW
SSDRLTPLRMYTGHLGDVNCVKFHPNTMYLATGSSDNSCRLWDVQRGACLRLFLGHTDAV
TTLAISPDGKMMASSGLDCSIYLWDLGSARPIKKMSGHTGPVESLSFSAESSVLVSGGLD
CTVRCWDVKSAGGPRPRGYNDPFQGSNGALPMGPGELEWEGLGQTADLLGTYTTKRTPVI
KTHYTPRNLCMVAGSFVPPANKAA
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactctccggctccggcagccggcgcggccgctggcccggcacgcgcgtccgca
gagctcctgccatccgcggtgatggaatatctccaacaacacggtttcgacaaggctttg
caggcactacaaacagagctgcagcagactggcggcgagaaggaagcggatggcgaggcg
gagcctatcgccaacgccaatctggaggcggtcttccgcgcgccgggcgcgatcccactc
gagacgatggttaagcgcaacatcccgcaggccacgaccgtctcagtctcgactatgtct
gatcggattacgcccgagttcatcgcgcagtccaagtacatcatcgagaagctgcaggcg
cgcctcgaggagcaggcggatgctgaggagggccgcgcgtccggcatgagccaggcgagc
ttcatcgacccgagtgaccgcgttgaggggtataagcgctaccggcgatgggttagcgac
ggcctcgacatgtggaagttcgaattggacaatgtgtcgttcccattgttcgcgcacacc
ttcctggacctgatcgactttgggttcaccgaggccgcgcagaagttctacaaggacaac
tgcgagcaccacagggtatcccactcgtcagaactctcgtatttggccggcatcaacgca
ccgcaccagatcctgctggacccgtactgccagaggttgcggagtgaacggtaccagctt
ccgatgtcgcgcaactcattcgcgctgctcgtgcagtggctgagcggatcggggctcgac
gaggagtgggaagcggggctgcacagtgcgccaggacgtgcgaaagaggctgtccgcgcg
attgtgcaccagcgccttgacgtcaaggtctccgactctgggatgccagtggacaagatc
tcgatcgcatcagcctctggtctgttggcaggcctgctgccgcccgctacaactgcggac
gagttcaacggagctacgcagctcaagttgggccagccagccatgctggacaagttgaaa
gaggaggtgattcgtgttgtgcgggaggaggacgaggcagtgaacggtgcacccgacacg
ccagcagactcaacgatcaacggctacgccaacgggacggacgcgaacggcgacgtggag
atggccgacgcgcgctcgccagcgaagcaggtcaaactcgagccagacgcggatccagat
gtcgtcgcgcctgacccgacagaaacgttacccccgcaggcgacgttctacaaagtcacg
gatgtcaagcgcgaggtcgaagcggtgcgcgacaagcgcaagatgatccgccttggcgcg
tcgggggaagacagcaccggcacctccacaacgttgccgtccatcgttgcgtttacaatg
ttcgacggcggcgagaacatcacgtcggtcgagtttagcccagactcgagcctcatcgcg
gcgggctctgcggagagcactgtgaggttgtggagctcacggggcgagaagctcaaggcg
aagtcgctggactcatatggcagcatcatcgaagacgagggcatggcgatgcgcaagctg
gtcggacactcgggtcctgtatactcgatgtcattcgacccaatatccggctcaggcggg
ccaccgcacgccctcctctcgtcgtcccaggatggaacagtccgcctgtggagcatggac
acgtacagcaacttggctgtttaccgtggccacgggcgcgaggcagtgtgggatgtggag
tggggtcccttcggcgtgtactttgcctctgcgagccgcgaccgcactgcgcggctgtgg
agctcggaccggctaacccccctacggatgtacacgggacatctcggcgatgtgaactgc
gtaaagttccacccgaacacgatgtatctcgcgacgggctcgagcgacaactcctgtcgg
ttgtgggacgttcagcggggcgcgtgtctacgtcttttccttggccacacggacgccgtc
acgacactcgcaatcagccccgacggcaagatgatggcgtcctcgggtctcgactgctca
atctacctgtgggacctggggagcgcgcgcccgatcaagaagatgagcgggcacactggg
cctgtggagagtctgtctttcagtgcggagagcagcgtcctcgtcagcggtgggctggac
tgcaccgtgcgctgctgggacgtcaagagtgccggcggaccgcggccgcgtggatacaac
gacccgttccagggtagcaatggggcgttacccatgggtcccggcgagttggagtgggag
ggcctgggccagactgccgacctgctgggtacttatacaactaagcgtacacccgtgatt
aagacgcactacacgccgcgcaacttgtgtatggtggcgggctcgtttgtgccgccggct
aacaaggcggcgtag
DBGET
integrated database retrieval system
