Cutaneotrichosporon cavernicola: CcaHIS019_0604020
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Entry
CcaHIS019_0604020 CDS
T09540
Symbol
CcaverHIS019_0604020
Name
(RefSeq) uncharacterized protein
KO
K18716
nucleoporin NUP42
Organism
ccac
Cutaneotrichosporon cavernicola
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0604020 (CcaverHIS019_0604020)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CcaHIS019_0604020 (CcaverHIS019_0604020)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
zf-CCCH_4
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
85497813
NCBI-ProteinID:
XP_060459208
UniProt:
A0AA48L8Q1
LinkDB
All DBs
Position
6:complement(join(1026062..1028159,1028391..1028531,1028568..1028602))
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AA seq
757 aa
AA seq
DB search
MSQQVCRNWLSGNCRYGTSCRFQHPPRGSQGGFGGFSAANSQPLGQRMAAAGQSKYQFND
DTIRLELSAERPQWPASVFGVAKYEPNVLGTDVSPEELRWKSVQALKANNVQSYVQEEAK
ILGDAKAVLDNAQSNISQVTKTAERLHDARFKDGQAPGGPRPPDFNEAAVLSNTGGSGFG
QSAFSGGSGSGSGFGGGTGFGGNTAAAPSAFGNSSFGQKPAGSAFGAPAAGKSAFGSSSF
GSNSGSGTFGTPAAGSAFGAANAGGSAFGQSSFGQKPAGSSFGNSAFGSSPSISAFGSSA
QAGSGFGSTSTPQTGSAFGQSTFGQKPAGSAFGQSSFGQNNTQATGFGASTTAPAPGSGF
GQSAFGKPATVTTAPATGAGFGQSAFGQSTQSSAFGQSSFGKPATGAFGSNASGGFAANT
GGFGSNTAALATGFGSTTTPAAGSGFGGNNTTAPAATSAFGSTNTAAPAAGSAFGQSGFG
KPATTSAFGQSAFGQSSASAQPQSAFDQSSTTAQPSAFGQPSQPQSTFGQPPTQSATSAF
GQPSQPQSAFGQSAFGKPATSAFGASTSSSTPAATTSAFGSTPAATASAFGSTPAATTSA
FGSTPAATTSAFGSTPAATTSAFGSTAPTTSAFGASAPATSAFGQPSTSTTNSAFGQPAA
SASTTSAFGQPKPTGASAFGASSAFGTPASAPAFSGFGKSAQTTSSGPAGWSWDDPWSAF
LPGGEGALDDALDAAFKAVSFELDAIPLVPPPVALRG
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaacaagtctgccgaaactggttgtctggcaattgccgttacggcaccagctgc
cggttccagcacccaccacggggctcgcaaggcggttttggaggtttctcagccgccaac
tcgcagccactaggccagcgcatggcggctgcaggccagtcaaagtaccagttcaacgac
gacacgatccgcctcgagctgagcgccgagcgaccgcaatggcccgcctccgtcttcggt
gtggccaagtacgagcccaacgtcctcggaaccgacgtctctcctgaagagcttcgctgg
aagtctgtccaagccctcaaggcaaacaacgtgcagtcgtatgtgcaagaagaagccaag
atcctcggcgacgcaaaggcagtactcgacaatgcgcagagcaacatatcgcaagtaact
aaaaccgcggagcgactgcacgacgcgcgtttcaaggacgggcaggctccaggcggtccg
cgaccacccgacttcaacgaggctgccgtgctctctaacactggagggagcggctttggc
cagagtgcctttagcggagggagtgggagtgggagcggctttggtggaggaaccggcttt
ggtgggaataccgcagctgctccaagtgcctttggcaactcaagcttcggccagaagcca
gccgggagtgcgttcggcgcgccggccgctggcaagagcgcatttgggagcagctcgttt
gggtccaactctggctctggcacgtttggcactccagcagcggggagcgcgttcggcgcg
gccaacgcgggaggaagcgcttttgggcagagctcgttcggacagaagccggccggctca
tcattcgggaacagcgcgtttggctccagtccgtcaatcagcgcgtttggctcgagtgcg
caggctggctctggattcggctcgacctcgactcctcaaactgggtcagcgttcggacag
agcacatttgggcaaaagcctgccgggagcgcgttcggccagagctcgttcggccagaac
aacacgcaggccaccggcttcggcgcatcgaccacggccccagctcctggctccggcttc
ggccagagcgcattcggtaagcctgcgactgtgaccacggctccagccactggagcaggg
ttcggccagagcgcgttcggtcagtcgacacagagctcggcgttcggccagagttcgttt
ggcaagccggccaccggcgcttttgggagcaacgcctcaggcggatttgcggccaacact
ggcggctttggcagcaacaccgcggccctggctactggattcggcagtaccactacgcca
gcggctggtagcggcttcgggggcaataacaccaccgctccagccgccactagcgcgttt
gggagcaccaacacggccgctccagccgccggcagcgcctttggccagtcaggattcggc
aagcctgccaccacgagcgccttcggccagtctgcgttcggccagtcctctgcatctgcg
cagccgcagtctgcgttcgaccagtcctccacaacggcgcagccatcggctttcggtcaa
ccctcgcagccccagtccacctttgggcagccccccacccagtcggcgacgtcggccttt
ggccagccctcgcagccccaatccgcgtttgggcagagcgcgtttggcaagcccgccacc
tcggcgtttggcgcctctaccagtagctccacgccggccgccacgacaagtgcgtttggc
tccacgccggccgcgacagcaagtgcgtttggctccacgccggccgcgacaacaagtgcg
tttggctccacgccggccgcgacaacaagtgcgttcggctccacgccggccgccacgaca
agcgcgttcggctccactgcgcctactacaagcgcctttggtgcatcggcacctgccaca
agcgcatttggccagccctcaacgtccaccaccaacagtgcattcggccagccggcggcc
tctgcgtccaccaccagcgccttcgggcaacccaaaccgactggggctagtgcgttcggc
gcatcatcggcatttggcaccccagcctccgcccctgccttcagcggcttcggcaagtct
gcccagacaacgagctcaggcccagccggctggagctgggacgacccctggtccgccttc
ctaccgggtggggagggcgcgctcgacgacgcgctcgacgcagcattcaaggccgtgtcg
ttcgagctggacgcgattccactcgtaccccctccggttgcgttgcggggttag
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