KEGG   Cutaneotrichosporon cavernicola: CcaHIS019_0604570
Entry
CcaHIS019_0604570 CDS       T09540                                 
Symbol
YRA1, CcaverHIS019_0604570
Name
(RefSeq) uncharacterized protein
  KO
K12881  THO complex subunit 4
Organism
ccac  Cutaneotrichosporon cavernicola
Pathway
ccac03013  Nucleocytoplasmic transport
ccac03015  mRNA surveillance pathway
ccac03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CcaHIS019_0604570 (YRA1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    CcaHIS019_0604570 (YRA1)
   03015 mRNA surveillance pathway
    CcaHIS019_0604570 (YRA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccac03019]
    CcaHIS019_0604570 (YRA1)
   03041 Spliceosome [BR:ccac03041]
    CcaHIS019_0604570 (YRA1)
Messenger RNA biogenesis [BR:ccac03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CcaHIS019_0604570 (YRA1)
    TREX complex
     CcaHIS019_0604570 (YRA1)
Spliceosome [BR:ccac03041]
 Complex C
  Other components
   EJC/TREX
    CcaHIS019_0604570 (YRA1)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CcaHIS019_0604570 (YRA1)
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded
Other DBs
NCBI-GeneID: 85497868
NCBI-ProteinID: XP_060459263
UniProt: A0AA48L8N7
LinkDB
Position
6:join(1149426..1149461,1149625..1150009,1150043..1150066,1151089..1151288,1151331..1151354)
AA seq 222 aa
MASMDIDKPLDEMIAAKPRGRRGGRGRGASSASAPSRDAAPRGAAGARARYSGSAPRNVS
QTQRAAVVPAANKPVTADATKIIISNLPTDVTEAQVRDLMQSTVGPVRALHMAYTASGKS
SGSATVIFKNRGDANKAHTTYHNRMIDNQRPMKVEIAIDPNAVASSLAARVATPRAAKPD
SKSSAPRGRRAPPPSRPRAARPAKKSAEDLDAEMEAYKTTTA
NT seq 669 nt   +upstreamnt  +downstreamnt
atggcttccatggacatcgacaagcccctcgacgagatgatcgccgctaagcctcgtggc
cgtcgtggtggccgtggccgtggtgcttcctcggcctctgccccctcccgcgacgcggct
ccgcgtggtgcggctggcgcgcgtgcgcgctactctggttccgccccgcgcaacgtgtcg
cagacccagcgcgctgctgttgtgcccgctgctaacaaacccgtgaccgcggacgctacc
aagatcatcatctccaaccttcccacagacgtgaccgaggcacaggttcgcgaccttatg
cagtcgaccgttgggcctgttcgcgccctccacatggcttacaccgcgagcggaaagagc
tctggcagcgcgactgtcatcttcaagaaccgcggtgacgccaacaaggctcacacgacg
taccacaaccggatgatcgacaaccagcgccccatgaaggtcgagatcgccatcgacccc
aacgctgttgcgtcgtcgctcgccgcgcgcgtcgccacacctcgggctgctaagcccgat
tccaagtcgtcggcaccccgcggccgccgcgctccccctccctcccgccctcgcgcggcc
cgtcccgccaagaagtcggccgaggacctcgatgccgagatggaggcgtacaagacgacg
actgcttag

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