Cutaneotrichosporon cavernicola: CcaHIS019_0605280
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Entry
CcaHIS019_0605280 CDS
T09540
Symbol
NOP4, CcaverHIS019_0605280
Name
(RefSeq) uncharacterized protein
KO
K14573
nucleolar protein 4
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CcaHIS019_0605280 (NOP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccac03009
]
CcaHIS019_0605280 (NOP4)
Ribosome biogenesis [BR:
ccac03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
CcaHIS019_0605280 (NOP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
85497939
NCBI-ProteinID:
XP_060459334
LinkDB
All DBs
Position
6:complement(join(1352915..1354310,1354350..1355416,1355450..1355779))
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AA seq
930 aa
AA seq
DB search
MDADFIPLEGTLVPTPKKERAPREPKANTTLFVSSLPYNATSTDLVTHFSFVGPVRHGFV
ATDRESGKSKGVGYVTYAMKEDAERAVTELDGSEFGAKGRKIRVSWADKKPGKEMTDVRP
AKKARVAAGEEGEDTDPNAIRTIVLTGLPADITKAVLWKKVRKVHSGIELAFPVEGEDAT
AHLVFPTHGEAVKGIPKLHGHTYKGALLSAVLKKRLAVLSSKGEGKAPSHAGRLIVRNLA
WETTEADLRATFLPFGPIQAIDLPTLPSKLPTEPGKPAPPPRARGFAFVWFMARKDAEKA
MAAVNGKPIKAAPNAAVAKGKQGRLAKKGEVGDGRPVAVDWAMSKEKFEGAKKQDVKADE
GSEEESGSSSDSDSDSSDSGSDDSESDDEEEVDAQVDADIDMEDASGDSSSDDSDDSDDS
DEGSDEEDEDEDEGPVKPKLPDTDVGSTLFLRNVPYEATEQEVGSLFQSFGPIRYAKVTI
DHATGRTRGTGFVCFWNKEHADAAIAEADRVAFETGTAAPGKAGGERKNPFALPSVLTAD
PSSSLASRLVLHGRTLNVSRAVTRETAGHLAEDNQRAREKGDKRNTYLMREGVVFPNSPA
AAALPPSEVEKRQAAFNTRKTLLRSNPSLYISKTRLSIRQLPLFVTDRGLKRLGIHAVRA
FDDEVKAGTREGLTRIEQDDDTLSAALEGRTKKKGERPTSVVQSKIVRQNEKVDPLTGRG
RSKGYGFLELRSHREALKVLRWANNNEAVGPLLLEWWNAEIADIREHARKELEAVKGGKE
GKETKEELESRLKKLDGRVGEGDERNGGGMRGGKTLMIEFSVENVQVVRRRVEKVSGPRE
RQEGGRDKGKRKADDDEERDAKRPRRDSKPDKSRRDSRGREEKGGKKSEGGKPESKPRAE
KADEPRGIEKLGSHLGSLIGRKRKQRKGGK
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggactttatcccactcgagggcacactggtgccgacccccaagaaggagcgc
gcacccagagagcccaaggccaacaccacgctcttcgtctcatcgctcccttacaatgcc
acctcgaccgatctcgtgacgcacttctcgttcgttgggccggtgcgccatggcttcgtc
gcgacggaccgcgagagcggcaagtccaagggtgtgggatatgtcacatacgcgatgaag
gaggacgccgagcgggctgtcaccgagctcgacgggagcgagtttggcgccaagggacgc
aagatccgcgtgtcgtgggccgacaagaagccggggaaggagatgacggacgtgcgtccg
gcgaagaaggctcgcgtggctgctggtgaggagggggaggacaccgaccccaacgctatc
cgcacgatcgtcctcaccggcctaccggccgatatcaccaaggctgtcctctggaagaag
gtgcgcaaggtgcactcgggcatcgagctcgctttccccgttgagggcgaggacgcaacg
gcacacctcgtcttccctacccatggcgaggcggtcaagggcatccccaagttgcatgga
cacacgtataagggcgcgctcctctctgctgttctcaagaagcgccttgctgtgctgagc
agcaagggcgagggcaaggcgcccagccatgctggccgtcttatcgtgcgcaacctcgca
tgggagacgaccgaagccgatctgcgcgcgaccttcctccccttcggacctatccaggcg
attgacttgccgactctgccgtccaagctccccaccgagcccggaaagcccgcccctccc
ccgcgtgcgcgaggattcgcctttgtgtggtttatggcgcgcaaggacgcggagaaggcc
atggctgcagtgaacggcaagccgatcaaggctgcgcctaatgcagcggtggccaagggc
aagcaggggcggttggccaagaagggtgaggtcggcgatggacggccggtcgcggtcgac
tgggctatgagcaaggagaagtttgagggcgccaagaagcaggatgtgaaggctgatgag
gggagcgaggaggagagtggcagcagcagcgactcggactctgactccagcgacagcggg
agtgacgacagcgagagtgacgacgaggaggaagtcgacgcccaggtcgacgcagacatc
gacatggaggacgccagcggcgactcaagcagtgacgacagcgacgacagcgacgacagc
gatgaggggagcgatgaggaagatgaggacgaggacgaggggcccgtcaagcccaagctg
ccggataccgacgttgggagcacgctcttcctccgcaatgtgccatacgaggcgacagag
caggaggtcggctctcttttccagtcgttcgggcccattcgctatgccaaagtgacgatc
gaccacgcgaccgggcgcacgcgcggaacaggcttcgtgtgcttctggaacaaggagcat
gctgatgcggctatcgccgaggctgaccgcgtcgcattcgagacgggcaccgccgcgccg
ggcaaggctgggggcgagcgcaagaaccccttcgctctcccatccgttctgacggctgac
ccttcctcttcgctggcgtcgcgtctcgtgctgcacgggcgtacgctcaatgtctctcgc
gccgtcacgcgcgagacggcgggccacctcgcagaggacaaccagcgcgcgcgtgagaag
ggcgacaagcgaaacacgtaccttatgcgtgaaggtgtcgtctttccgaactcgcctgcc
gctgccgcccttcccccgagtgaggtcgagaagcgccaagccgcgttcaacacgcgtaag
acactcctccgctcgaacccctcactgtacatctccaagacgcgtctgagtatccgccag
cttcctctcttcgtgaccgaccgcgggttgaagcgcctgggcatccacgcagtgcgcgca
ttcgatgacgaggtcaaggcgggcacgcgcgagggcttgacgaggattgaacaggacgac
gacacgctctcggccgccctcgagggacggaccaagaagaagggagagcgcccgacgtct
gttgtgcagtccaagattgtgcgacagaacgagaaggtcgaccctctcacaggccgcgga
cggagcaagggctacggtttcctcgagctccgctcccaccgggaagcgctcaaggtgctt
cggtgggcgaacaacaacgaggcggtcggcccgctcctgttggagtggtggaacgccgag
atagccgacattcgcgagcatgcgcgcaaggagctcgaggcggttaaggggggtaaggag
ggcaaggagaccaaggaggagcttgagtcgcgcctgaagaagctcgacggacgggtcggc
gagggcgacgagcgcaacggcggtggcatgcgtggcggcaagacgctgatgatcgagttc
tcggtcgagaacgttcaggtcgtgcggcggcgagtggagaaggtctctggcccgcgtgag
cgccaggaagggggccgcgacaagggcaagcgcaaggccgacgacgacgaggagcgcgac
gccaagcggccacgccgcgactcgaagcccgacaagagccgacgcgacagtcgaggaagg
gaggagaagggcggcaagaagagcgagggcggcaagcctgaatccaagcccagggctgag
aaggcggacgagccgcgtggtattgagaagctcggctcgcacctcggcagcctgattggg
cggaagcgcaagcagcgcaaggggggcaagtga
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