Cutaneotrichosporon cavernicola: CcaHIS019_0606600
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Entry
CcaHIS019_0606600 CDS
T09540
Symbol
CcaverHIS019_0606600
Name
(RefSeq) uncharacterized protein
KO
K14315
nucleoporin NDC1
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CcaHIS019_0606600 (CcaverHIS019_0606600)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0606600 (CcaverHIS019_0606600)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CcaHIS019_0606600 (CcaverHIS019_0606600)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
85498071
NCBI-ProteinID:
XP_060459466
UniProt:
A0AA48QYA8
LinkDB
All DBs
Position
6:complement(join(1699619..1700884,1700960..1701378,1701443..1701533,1701573..1701602,1701655..1701693))
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AA seq
614 aa
AA seq
DB search
MSTTLQPAKAPVSPLVRIDAHYRKALAFRWQELVIRAFFVTAVSFLLVPAVLLGWRPSLL
TFSSLLFTTPIIYLLTTHIVLRSRRSWIESPPLLPASPSALSVWFGTFSHPVLALLAAQA
SAAIFFALAFAGVQNHLYPSSGLGWSSASTPRYPWHWNERLWFLVFGNTVFFGLLALRDV
LVGNVGPKWPQSRAAFPVVIQRALGQLFTAGPSSLIAELANAAQFTVVYTLVYFTLRRSV
WRMAVTYLPFLRPFALNFAKKGSLSWGLAYYLLVLQITGLFALKPALAVVNDYLCQPLPF
PSFTRKSPLSADKYLLTALESTNAFYLGHTMVELQRAAHSVKRRKEIFADASRPALVHEL
FRALLLVLGDSYSTLAAKGRKLSSAPLAPVPPVHDGLSMPVKAGDIFRPVPKPGALQGFV
STVLEGKPAPTPAPVRAALDRAHAAEVAVAKKVETDVPVFERWVGGTPFLSPVLAGVKLA
RGGFSAWAGREWSRRAVAAAVPEPDRLARIVDILATFCVAAYDEDEYGSVQAVLPSTLEA
LVRVRGAALALGADLVTTAPKVSSSAADAARADCAAVAAIAENGIRRIADRFSATLTAFR
FPTGIATALTDVCK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaacgctgcagcctgccaaggcgcctgtgtcgccactggtgcgcatcgacgcc
cactacagaaaagcgctagcgttccgttggcaggagctcgtgatccgcgcgttctttgtg
acagcggtgtccttcttgctcgttccagcagtgttgttaggctggcgtccgtctctcctt
accttctccagcctcctcttcaccactcccattatctacctcctcacaacgcacatcgtc
ctccggtccaggcggtcgtggatcgagtcgccgcctctgcttcccgcctcgcccagtgct
ctctccgtgtggttcggcaccttctcccacccggtcctcgctttgctggcagcgcaggct
tcggctgccatcttcttcgctctcgctttcgctggcgtgcagaaccacctctatccatct
agtggattggggtggagcagcgcgtcgacgccccgatacccatggcactggaacgagcgg
ctctggttcctcgtgttcgggaacactgtgttctttggactcctcgcgctcagagatgtg
ctagttggcaatgttgggcccaaatggccccagtcgagggccgccttccccgttgtgatc
cagcgcgcactcgggcaactcttcactgctggtccgtcatctctcattgcggaactcgcg
aacgctgcccagttcacggtcgtttacactctcgtctacttcactctccgccgctcggtt
tggcgcatggccgttacgtacctcccattcctgcgtcccttcgcgctcaactttgcgaag
aaaggctctctctcctggggcttagcgtactatctccttgtcctccagatcacgggcctg
ttcgcgcttaagcctgccctcgcagtcgtgaacgactacctctgtcagcccctccccttc
ccgagctttacgcggaagagccccctcagcgcagacaagtacctcctcaccgcgcttgag
agcaccaacgccttctacctcgggcacaccatggtggagctgcagcgtgctgcgcactca
gtcaagcgcaggaaggagatcttcgccgacgcctcgcgcccagcgctggttcacgagctt
ttccgcgcgctcctcctcgttctcggtgactcgtattccactctcgccgcgaagggccgc
aagctctcgtccgcccccctcgctccagtcccacccgtgcatgacggtctcagcatgccg
gtcaaggcgggtgacatcttccgccccgtgcccaagcctggtgcgctccagggcttcgtg
tccaccgtgctggagggtaagcctgccccgacgcctgcgccggtgcgtgcggcacttgac
cgcgcgcacgctgccgaagtcgccgttgcgaagaaggtcgagaccgacgtgcctgtcttc
gagcgctgggtgggtggcacaccgttcctcagtcccgtgctcgcgggcgtcaagctcgcg
cgcggcggtttcagcgcgtgggccggacgcgagtggagccgccgcgctgttgctgccgcg
gtcccagagcccgaccgcctcgcccggatcgtggacatccttgccacgttctgtgtcgca
gcctacgacgaagacgagtacgggtccgtccaggccgtgctgcccagcacgttggaggcg
ctcgtgcgcgtgcgtggtgccgcgcttgccctcggcgctgacctggtgaccacggcaccc
aaggtatcgtcctcggcggcagatgccgcccgcgcggactgcgctgcggtcgcggccatc
gccgagaacgggatccgacgcatcgccgaccgcttcagcgcgactctcaccgcgttccgt
tttccgaccggaatcgcgaccgccctcaccgatgtctgcaaatag
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