KEGG   Cutaneotrichosporon cavernicola: CcaHIS019_0701490
Entry
CcaHIS019_0701490 CDS       T09540                                 
Symbol
exo2, CcaverHIS019_0701490
Name
(RefSeq) uncharacterized protein
  KO
K12618  5'-3' exoribonuclease 1 [EC:3.1.13.-]
Organism
ccac  Cutaneotrichosporon cavernicola
Pathway
ccac03008  Ribosome biogenesis in eukaryotes
ccac03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccac00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CcaHIS019_0701490 (exo2)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CcaHIS019_0701490 (exo2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccac03019]
    CcaHIS019_0701490 (exo2)
   03009 Ribosome biogenesis [BR:ccac03009]
    CcaHIS019_0701490 (exo2)
   03016 Transfer RNA biogenesis [BR:ccac03016]
    CcaHIS019_0701490 (exo2)
   03036 Chromosome and associated proteins [BR:ccac03036]
    CcaHIS019_0701490 (exo2)
Messenger RNA biogenesis [BR:ccac03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     CcaHIS019_0701490 (exo2)
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     CcaHIS019_0701490 (exo2)
Ribosome biogenesis [BR:ccac03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    CcaHIS019_0701490 (exo2)
Transfer RNA biogenesis [BR:ccac03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    CcaHIS019_0701490 (exo2)
Chromosome and associated proteins [BR:ccac03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    CcaHIS019_0701490 (exo2)
SSDB
Motif
Pfam: XRN_M XRN_N XRN1_D1 XRN1_D2_D3 Metallophos SH3_12 Trypan_PARP STPPase_N
Other DBs
NCBI-GeneID: 85498447
NCBI-ProteinID: XP_060459842
UniProt: A0AA48QYI7
LinkDB
Position
7a:join(380226..380229,380268..380278,380314..380396,380432..380441,380487..380790,380824..380933,380974..381173,381207..381631,381665..383892,383929..384700,384735..385060,385683..385796,386408..386491,386560..387058,387112..387347,387383..387391)
AA seq 1804 aa
MGVPKFFRWISERYPLTSQLITPNSIPTFDNLYLDMNGIIHNCSHPPSSENDPHFRITEE
QMILAIFQYIDFLFTKIKPQKVFFMAIDGVAPRAKMNQQRSRRFRTARDAREQREAAERK
GEQLPEEKAFDSNCITPGTPFMARLSDHLKYYVRKRMSEDAEWRGVQVILSGHDVPGEGE
HKIQEYIRMSKAQPGYNPNTRHCLYGLDADLVMLGLLSHDPHFCLLREEVTFGRKVKKSS
TLQNSNMFLLHLSLVREYLDLEFASVATQISFKYDLERIIDDWILMGFFVGNDFLPHLPG
LHINEGGLEYIWKVYKEVLPVAGGYINEHGTINLPRLQLLLDKLTNYERDTFAEQFASAS
WHKGKQEKDVAALEKARKRGKLIITKSQNKLLDQVKTFVKKHQSHPTAEDRFTLVNELDE
RDRSFVQSLADDLHLRCTWDEVDDYGQPLIVLSFNVDALSEPGEGDEVEEEWESDEDTES
AMAIQRVLDKFAKAKIVDDDLEDAGQSFEEKMDEKIEEWKRGYYKEKLNINWNDPESLHP
ILYRYVEGLQWVISYYYKGVPAWGWFYDYHYAPMISDLKNIASFQFNLELGTPFKPFQQL
MGVLPADSQDHVPQAYRDLMNDETSPIYDFYPRAFDLDMNGKKQDWEAVVKIPFIDESRL
LKAMAARDHRLTPEEKRRNEGNERPTSFVYDPENETHYPSSLPGFFPDLVACHVAVNQFI
LPTLGEDAELKLGLIDGVLLGASALFGFPSLATLPYQGSLGYQSVHVFNQDSRNQSMVIT
ITKKSDSRNTGEIAKTILGQRAFHDWPYLREGIVAGIADDMFKYELQSNADGSTKIVSKP
HQAMDTIKWKKDGDKIEDYYSKRCGVIIGNVDVVVYVRPLKGLKRVDTGALVKDYEGADK
EIPQAVQMLVNQVAYEDERYIEKDAPPIAQEFPVGEKVIFLGALAYGGAAQVAGTNGDTL
DVALSYFQSDKQETALFKGLVDSRPSGYWYPSHVLSRQLGMSGLALSRITSSLMVAPEKG
TQKFNIGLQLKFESKGMKVLGYSRKVDRGWEFSAKAAQLIHSYKLAFPEPFRHFDKRGHD
IVTSAELCPSSDNPDEVIKAMRQWIKDHGILDLDPVSLNSEALDQDTVMQLEAMGDRLKE
RKSMDQLRRAQVKGIPRQAVLKPSHAIYRLIGQTFALGDRVVMVQDAAAGGVPLAMKGVV
VGLGMRDIDVVWDVPFMGGETLGGRCSNYRGSTVSFAACLNLTNPQFAVGPKAQPAPLGN
AAPFKPQIGPRPAVAPNNYQPSRPGRNPVIIQNPARHGQPSNGNLHFGNAAKGIGTPAAQ
QQVSHHVRLTSALKGGAPRQHIAKGPHIRPVSPTTRHHQLPKPLSPATTLQELMPPLPPA
SAGRCPKAKPKPKPKPKPKPKPKPKPKPKPKPKPKPKPKPKPKPKPKPKPKPKPHRVITV
KATGRTTVGKATATAAEAVVVAAPTLGSKVLHTLLRRKTVLLLPRATLPTAPALLTTTMS
SNDEVDGWIAQLMQCKPLSETEVKKLCDKAREVLMEESNVQPVRCPVTVCGDIHGQFHDL
SELFRIGGNSPDTNYLFMGDYVDRGYYSVETVTLLVGLKLRYRDRVTILRGNHESRQITQ
VYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIDNQIFCLHGGLSPSIDTLDHIRSIDR
IQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEAFNHNNGLTLVARAHQLVM
EGFSWSQERNVVTIFSAPNYCYRCGNQAAILEVDDALKYTFLQFDPAPRAGEPLVSRRPP
DYFL
NT seq 5415 nt   +upstreamnt  +downstreamnt
atgggtgtcccgaagttcttccgctggatctctgagaggtatcccctcacctcgcagctg
atcacgcctaactcgatcccaacatttgacaacctctaccttgacatgaatggtatcatc
cacaactgctcccatcccccatcatccgagaacgacccgcacttccgcatcaccgaggag
cagatgatcctagcaatcttccagtacatcgacttcctctttaccaagatcaagccccag
aaggtcttcttcatggcgattgacggcgttgcgcctcgtgccaagatgaaccagcagcgc
tcccgtcgcttccgcaccgcgcgtgacgcgcgcgagcaacgtgaagccgctgagcgcaag
ggagaacagctcccggaggagaaggcgttcgactcgaactgtatcacccctggcacgcca
tttatggctagactgtccgaccacctcaagtactacgttcgtaaacgtatgtccgaggac
gccgaatggcgcggtgtccaggtcatcctcagtgggcatgatgttcccggagagggagaa
cacaagatccaagagtacatccgcatgagcaaggctcagccgggctacaatcccaacaca
cgtcactgtctctacggcctcgatgccgacctcgtcatgctgggcctcctcagccatgac
ccccacttctgcctcctccgtgaggaggtcacattcggccgcaaggtcaagaagagctcg
accctccagaactccaacatgttcctcctgcacttgtcgctggtgcgcgagtacctcgac
ctcgagtttgcatctgtcgcgacgcaaatctcgttcaagtacgacctcgagcgcatcatt
gacgactggatcctgatgggcttctttgtcggaaacgacttcttaccacatcttccaggc
ctccacatcaacgagggtgggctggaatacatctggaaggtctacaaggaggtgctcccc
gtggctggcggctacatcaacgagcacggcactatcaacctcccccgcctgcagctgctg
ctcgacaagttaaccaactatgagcgcgacacgtttgccgagcagttcgccagcgcgtca
tggcacaagggcaagcaggagaaggacgtggctgccctcgagaaggctcgcaagcgcggc
aagctcataatcaccaagagtcagaacaagctcctcgaccaggtcaagacctttgtcaag
aagcaccagagccaccccacagcagaggaccgcttcacgcttgtcaacgagctcgacgag
cgcgaccgctcgttcgtccagagccttgcggacgacctacacctgcgatgcacgtgggac
gaggtcgacgattacgggcagccgctcatcgtccttagtttcaatgtcgacgcgttgagt
gagccaggcgagggcgacgaggtcgaggaggaatgggagtccgacgaggatacggagagt
gcgatggctatccagcgtgtgctcgacaagtttgccaaagctaagatcgtcgacgacgac
ttggaggacgccgggcagtcgttcgaggagaagatggacgagaagattgaagagtggaaa
cgcggctactacaaggagaaactcaacatcaactggaatgaccccgagtcgctccacccc
atcttgtaccgctacgtcgagggcctccagtgggtcatcagttactactacaagggtgtt
cccgcttggggctggttctacgactaccactacgcgcccatgatctccgacctcaagaac
attgcgagtttccagttcaacttggagttgggcacgcctttcaagcccttccagcagctc
atgggcgttctgcccgccgactcgcaggaccacgtcccgcaggcgtaccgggacctgatg
aacgacgagacctcgccgatctacgacttctacccgcgtgcgttcgacctcgacatgaac
gggaagaagcaagactgggaggccgtcgtcaagattccattcattgacgagtcacgtctc
ctcaaggcgatggctgcccgcgaccaccgccttacgcccgaggagaagcgccgcaacgag
ggcaacgagcgcccgacctcgttcgtgtatgacccggagaacgagacgcactacccctcc
tcactcccaggcttcttccctgatctcgtggcttgccatgtggccgtcaaccagttcatc
ctgccaacattgggggaggacgccgagctcaagctgggcctcattgatggcgtcctcctc
ggtgcttcagcactctttggcttcccctcgctcgcaaccctcccctaccagggctcgctg
ggctaccaaagcgtccacgtgttcaaccaggacagtcgaaaccagtcgatggtcatcact
atcacgaagaagtccgacagccgcaacactggcgagattgcgaagactattctcggacag
cgcgcgttccacgactggccatacttgcgcgagggcatcgttgccggcatcgctgatgac
atgttcaagtacgagctgcagtcgaacgccgacggctcgaccaagatcgtgtccaagccc
caccaggctatggacacgatcaagtggaagaaggacggcgacaagattgaagactattac
tcgaagcgctgcggcgttatcatcgggaacgtggacgttgtcgtttacgtccggcccctc
aagggtctcaagcgtgtcgacacgggcgctcttgtcaaggactacgagggtgcggacaag
gagatccctcaggccgtacagatgctcgtcaaccaggttgcttacgaggacgagcgttat
attgagaaggacgctccccctatcgcgcaggagttccccgtcggagagaaggtcatcttc
ctcggtgcgctcgcgtatggcggtgctgcgcaggtcgccggcacgaacggcgacacactg
gacgtcgcactgtcttacttccagagcgacaagcaggagactgcgttgttcaaggggtta
gtcgactcacgcccatctggttactggtacccgtctcacgtgctttcccgacagttgggc
atgagcggtcttgcgctctcgcgcattacgtcgtcccttatggttgctccagagaagggc
acgcagaagttcaacattggcctgcagctcaagttcgagtccaagggcatgaaggtgctc
ggctactcgcgcaaggttgataggggatgggagttctcggccaaggccgctcaactcatc
cactcgtacaagctggcgttccccgagccgttccgtcactttgacaagcgcggccacgac
attgtgacgtcggccgagctgtgtccgtcgtctgacaacccggacgaggtgataaaggcc
atgcgtcagtggatcaaggatcacgggattctcgacttggaccccgtgtcgctcaactcg
gaggcccttgaccaggacacggtcatgcagcttgaggcgatgggcgaccgtttaaaggag
cgcaagtccatggaccagctgaggcgcgcgcaggtcaagggtatcccgcgccaggcggtg
ctcaagccctcgcacgccatctaccgtctgattggacaaacgttcgcccttggtgaccgt
gtcgtcatggtccaggatgccgctgctggcggcgtgcctctcgccatgaagggcgttgtc
gtgggtcttggcatgagagacattgacgtcgtttgggacgtgccgttcatgggcggcgag
acgcttggtggccggtgctccaactaccgtggttcgacagtgtccttcgcggcatgcctc
aacctcaccaacccgcagttcgctgtcggccccaaggcccagcctgcgccattgggcaac
gctgcgccattcaagccacagatcggcccacgtccagctgttgctcccaacaactaccag
ccgtcgcgccctggccgcaacccagtcatcattcagaatcctgctcggcacggtcagccg
tccaacggcaacctgcactttggcaacgcggccaagggcattgggacgccggctgcgcag
cagcaggtgtcgcaccacgttcgcttgacgtcggcgctcaagggcggcgctcctcggcaa
cacattgctaagggtccgcatatcaggccggtgtcaccaacgacgcgtcaccaccagctg
cccaaacccctgtcgcccgcgacaacgctgcaagaattgatgccgccgcttccgcctgcg
tctgcgggtcgatgccccaaggccaagcccaagcccaagcccaagcccaagcccaagccc
aagcccaagcccaagcccaagcccaagcccaagcccaagcccaagcccaagcccaagccc
aagcccaagcccaagcccaagcccaagcccaagcccaagccccacagggtcattacggtc
aaggccacgggcagaaccacggtgggcaaggccacggctaccgcggccgaggccgtggtc
gtggcggcgcctacactgggcagcaaggtgctccacaccctgttgcgccgcaagacggtg
ctcctgctcccgcgggcaactctccctaccgcgccagcgctactcacaaccaccatgtcc
tcaaacgacgaggtcgacggctggatcgcccagctcatgcaatgcaagcccctctccgag
acagaggtcaagaagctctgtgacaaggcccgcgaggtcctcatggaggagtccaacgtc
caacctgtccggtgccccgtgacggtgtgtggcgacatccacggccagtttcacgacctc
tccgagctcttccgcatcggcggtaactcgcccgacaccaactacctgttcatgggcgac
tacgtcgaccgtggctactactcggttgagactgtgactctccttgtcggtctcaagctg
cgctaccgtgaccgtgtgacgatcctacgcggcaaccacgagtcgcgccagatcacccag
gtttacggcttctacgacgagtgcctgcgcaagtacggcaacgccaacgtctggaagtac
tttaccgacctcttcgactacctgcccctcacggcactcatcgacaaccagatcttctgt
ctgcacggcggtctctccccctcgattgacactctcgaccacatccgctcgatcgaccgt
atccaggaggttccacacgaggggccgatgtgcgaccttctctggtctgaccccgacgac
cgctgcggctggggcatctcgccccgtggtgcaggttacacctttggacaggacatctcg
gaggcgttcaaccacaacaacggcctcacgctcgtcgcgcgtgcgcaccagctcgtcatg
gagggcttctcgtggtcgcaggagcgcaacgtcgtcaccattttctcggcgcccaactac
tgctaccgctgcggtaaccaggcggccatcctcgaggtcgacgacgcgctcaagtacacg
ttcttacagtttgaccccgcgccgcgcgctggcgagccgctcgtctcgcgccggcctcca
gactacttcttgtag

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