Cutaneotrichosporon cavernicola: CcaHIS019_0701900
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Entry
CcaHIS019_0701900 CDS
T09540
Symbol
ssr2, CcaverHIS019_0701900
Name
(RefSeq) uncharacterized protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CcaHIS019_0701900 (ssr2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccac03021
]
CcaHIS019_0701900 (ssr2)
03036 Chromosome and associated proteins [BR:
ccac03036
]
CcaHIS019_0701900 (ssr2)
Transcription machinery [BR:
ccac03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CcaHIS019_0701900 (ssr2)
Chromosome and associated proteins [BR:
ccac03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CcaHIS019_0701900 (ssr2)
PBAF complex
CcaHIS019_0701900 (ssr2)
GBAF(ncBAF) complex
CcaHIS019_0701900 (ssr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
DUF7573
Miga
SANT_DAMP1_like
RelB-like
Motif
Other DBs
NCBI-GeneID:
85498488
NCBI-ProteinID:
XP_060459883
UniProt:
A0AA48LA24
LinkDB
All DBs
Position
7a:join(503862..504092,504205..504313,504351..504734,505329..505469,505508..507423)
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AA seq
926 aa
AA seq
DB search
MPPQDAPSPTPSVAGKRGRGSTGPSAPRNKRRKGDGTGTPAPDSGAEGNTRKPVNFGVGM
VKGREEEWSEPADVKTKINFLDLPTETLYAYLEAHDLLPHWDVSPWSEQPCTPPTMAALY
TIPPPPPLVPINPEPKEKQPEAEPEAESESKPVEVDGEIAEDGIAVPTTRSKTAPLRQAT
SSSPAPNPAIKRGIMTLADVHAAHAVLAEKANQHWAKGLGGGQNREGETIVNFLYKNKVG
HTDALSGDVTAHDLATAPGKEREREPFFGGDTANISNSDAMDVDTNGGESSGVNQSAVVL
AGASPSVDPPADGATPVGAGDARMNSNDLHALATTYLASQTHPLVVPSYSSWFSLSTIHP
IERRSLPEFFSKRNRSKTPAIYKDYRDFMINTYRLNSGEYLTVTACRRNLAGDVGAIMRV
HGFLEQWGLINYQVDPDTRPAPLGPPFTGHFRVTVDTPKGLSNLHPGSKPGTGALGPVNG
VKPHPTNLDLRKVIYQSTAKTTKATTEEKAAKAAVEQSNGVAQPQPKSYACETCGTDCTR
TRYHSLKDGEYTVCPSCYVSGRFPSTMFSGDFVRLDDEVFKHGASGAGPEWTDQETLLLL
EGVEMYDDDWKAVADHVVTRSKEQCIAKFLQLPIEDNYLSADPAAQLGPLRYQAGMNGMP
FEGAENPVMSVVTFLASAVGPAVAAAAAQSALGELAQSLKRKRKDEDKDKEGEKRAKSED
VKPEAGEGTPAAAEEGSKSKSPEKDATAEAAEAEAADKDGDALSKSSLERAASVALGAAA
AKASTLASHEEGRLNALVSRLVAAQARKVELKLALFEKLEDVLEDEKRKLELDRQRLFRD
RLSVQKQLAEVERLLARARSEPKAVTPGEVEAVRTALAPNTAEQATRLAPEAEAAAVAEL
KADSAAPAPTGDGAQPPPPQPSVAQL
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgcctccacaagacgctccctctcccaccccatctgttgctgggaagcgcggccgcggc
tcgactggcccttctgcgccgcgcaacaagcggcgcaagggggatgggacgggaacgcct
gcgccagacagtggtgctgaagggaacacgcgcaagcctgtcaactttggtgtcgggatg
gtcaagggacgcgaggaggagtggagcgaacctgcagacgtcaagacaaagatcaacttt
ctcgacttacccacggaaacactctacgcctacctcgaggcacacgatctcctcccacac
tgggacgtgtcgccttggagcgagcagccatgcacgccaccaacgatggccgcgttgtac
acgatcccgccgcctccccccctcgtacccattaacccagagccaaaggagaagcagccc
gaggctgagccagaggccgagtccgagtccaaacccgtggaagttgatggggagattgca
gaggatgggatcgcggtccccacgacgcgcagcaagactgcccctctccgccaagcaacc
agctcatccccagccccgaaccctgcgatcaagagaggcatcatgactctggcggacgtt
catgcagctcatgcggtgctggcagaaaaggccaaccagcactgggccaagggccttggt
gggggccagaatcgcgaaggggagacgattgttaatttcctgtacaagaacaaggttggc
cacaccgatgctctctctggagatgtcaccgcacacgaccttgcaaccgcccccggcaag
gagcgggagcgcgaacccttctttggcggtgacacggccaacatcagcaactcggacgcg
atggacgttgacaccaacggcggagagtcgtctggcgtcaaccagtccgcggtggtactt
gcaggtgcgtcgcccagcgtcgaccctccagcagacggcgcgacgccagtcggcgcaggc
gacgcgcggatgaactcgaacgacctgcacgcacttgcgacgacgtatctcgcgagccag
acgcacccgctcgtcgtgccttcgtactcgtcgtggttctcgctgtcaaccatccacccc
atcgaacgcaggtcgcttcccgagttctttagtaagcgcaatcgctcaaagacgcccgcc
atctacaaggattatcgcgatttcatgatcaacacgtaccgcctcaactctggcgagtac
ctaactgtgactgcgtgccgccgcaacctcgccggtgatgtcggagcaatcatgcgcgtc
cacggcttcctcgagcagtggggtctcatcaactaccaggtcgacccagacacgcgcccc
gcgccccttggtccgccatttaccggtcacttccgcgtcacggtcgacacacccaagggt
cttagcaacctgcaccccgggagcaagcctgggactggcgcgcttggccctgtcaacggc
gtcaagccccaccccactaaccttgacctccgcaaggtcatttaccagagcacggccaag
acgaccaaggcgacgaccgaggagaaggctgccaaggccgctgttgagcagagcaacggt
gtggcccagccccagcccaagagctacgcctgcgagacatgcggcacagactgcacgcgc
acgcgctaccacagcctcaaggacggcgaatacactgtgtgcccgagctgttacgtgagt
gggcgcttcccgagcaccatgttctcgggcgactttgtgcgtctcgacgacgaggtgttc
aagcacggtgcgagcggcgccggtcccgagtggaccgaccaggagacgctcctcctcctc
gagggtgttgagatgtacgacgacgactggaaggccgtcgccgaccacgtcgtgacccgg
agcaaagagcagtgcattgccaagttcctccagctccccattgaagacaactacctgtcc
gccgaccctgcagcgcagctgggcccgctccgctaccaagcaggcatgaacggtatgccg
ttcgagggcgccgaaaaccctgtcatgagtgtggtaaccttcctggccagcgcggttgga
cctgcagtcgccgccgccgccgcgcagagcgcgcttggcgagctcgcacagagcctcaag
cgtaagcgcaaggacgaggacaaggacaaggagggcgagaagcgcgcaaagtcggaggac
gtcaagcctgaagctggcgagggcacccctgccgctgctgaggaagggtccaagtccaag
tcgcccgagaaggatgctacggccgaggcagctgaggctgaggcagcggacaaggacggc
gatgcgctgtccaagagctcactggaacgcgctgcgagtgtggccctcggtgctgcggcg
gccaaggcctcgaccctcgcgagccacgaggagggacgcctgaacgctctcgtgtcccgc
ctcgtggcggcgcaggcgcgcaaggtcgagctcaaactcgccctgttcgagaagctcgag
gacgtgctcgaggacgagaaacgcaagctcgagctcgaccgtcagcgcctcttccgcgac
cgtctttccgtgcagaagcagcttgccgaggtggagcggttgctcgcacgcgctcgctcc
gagcccaaggccgtcactcccggcgaggtcgaggccgtccgcaccgccctcgcacccaat
acggccgagcaggcgacgcgtcttgcgccggaggctgaagcggctgctgtggctgagctc
aaggccgattcagcggcgccagcgcccactggagacggtgctcaaccaccgcccccgcag
ccgtctgttgcccagctttag
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