KEGG   Cutaneotrichosporon cavernicola: CcaHIS019_0703970
Entry
CcaHIS019_0703970 CDS       T09540                                 
Symbol
CcaverHIS019_0703970
Name
(RefSeq) uncharacterized protein
  KO
K12876  RNA-binding protein 8A
Organism
ccac  Cutaneotrichosporon cavernicola
Pathway
ccac03013  Nucleocytoplasmic transport
ccac03015  mRNA surveillance pathway
ccac03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CcaHIS019_0703970 (CcaverHIS019_0703970)
  09122 Translation
   03013 Nucleocytoplasmic transport
    CcaHIS019_0703970 (CcaverHIS019_0703970)
   03015 mRNA surveillance pathway
    CcaHIS019_0703970 (CcaverHIS019_0703970)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccac03019]
    CcaHIS019_0703970 (CcaverHIS019_0703970)
   03041 Spliceosome [BR:ccac03041]
    CcaHIS019_0703970 (CcaverHIS019_0703970)
Messenger RNA biogenesis [BR:ccac03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CcaHIS019_0703970 (CcaverHIS019_0703970)
Spliceosome [BR:ccac03041]
 Complex C
  Other components
   EJC/TREX
    CcaHIS019_0703970 (CcaverHIS019_0703970)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_3 RRM_ACIN1
Other DBs
NCBI-GeneID: 85498686
NCBI-ProteinID: XP_060460081
UniProt: A0AA48QYX2
LinkDB
Position
7b:complement(join(435114..435207,435401..435495,435706..435842,435883..435912,436003..436014,436054..436081))
AA seq 131 aa
MADVDMGADARRDANGKSDWAARSVEGWIIIVTGLNEESTEEDLQDLFGEYGDVRNLSMA
LNRRTGYVMGYALIEYARKEEAEAAIKETDGTEFLEKKIHTDFAFAKAPAGARGGRGGPR
RRDRSLSPGRR
NT seq 396 nt   +upstreamnt  +downstreamnt
atggcggacgtcgacatgggcgcagacgcgcggagagacgccaacggcaagtcggactgg
gccgcgcgctccgtcgagggctggatcatcatcgtcacaggcctcaatgaggagtcgacg
gaggaggacctccaggacctgtttggggagtatggcgacgtgcgcaacctctccatggca
ttgaaccggcgaacgggttacgtgatgggctacgcgctcatcgagtacgcgcgcaaggag
gaggccgaggcggcgatcaaggagacggatgggaccgagttcctcgaaaagaagatccac
accgacttcgccttcgccaaggccccggccggtgctcgcggaggccgtggtgggccgcgc
cggcgcgaccgctcgttgagccctgggcgtcggtag

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