Cervus canadensis (wapiti): 122419629
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Entry
122419629 CDS
T07554
Symbol
LRFN5
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccad04990
]
122419629 (LRFN5)
Domain-containing proteins not elsewhere classified [BR:
ccad04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
122419629 (LRFN5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
Ig_DSCAM-DSCAML_C
C2-set_3
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
122419629
NCBI-ProteinID:
XP_043290288
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Position
17:complement(17725312..18016916)
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AA seq
717 aa
AA seq
DB search
MEKFLFYLFFIGIAVKAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLAD
NFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFS
GLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDH
NMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPALLTGRYFWSIPEEEFLCEPPLITRHTHEMRVLE
GQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVYDNGTLDILITTVKDTGAFTCIAS
NPAGEATQTVDLHIIKLPHLLNSTNHIHEPDPGSSDISTSTKSGSNASSSNGDTKMSQDK
IVVAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDTLVYRMIPPTSKTFLVNNLAAGT
MYDLCVLAIYDDGITSLTATRVVGCIQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVAS
VLVFIIILMIRYKVCNNNGQHKVTKVSNVYSQTNGAQSQGCSGTLPQSVSKQAVGHEENA
QCCKVAGDSVIPPSETCSSQDSSATTSALPPTWTSSTSAPQKQKRKTGTKPGAEAQSEAV
TNAESQNVNRNNSTALQLASRPPDSEGPASKRAHSKPNALPTNVDQIVQETQRPELI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattccttttttatctgtttttcattggcatagcagtgaaagctcagatctgt
ccaaagcgttgtgtctgtcagattttgtctcctaatcttgcaaccctttgtgccaagaaa
gggcttttatttgtgccaccaaacattgacagaagaactgtagaactgcgtttggcagac
aattttgttacaaatattaaaaggaaagattttgccaatatgaccagcttagtggacctg
actctgtccaggaatacaataagttttattacgcctcatgcttttgctgacttacggaat
ctgagggcattgcatttgaatagcaacagattgactaaaattacaaatgacatgttcagt
gggctttccaatctccatcacttgatattgaacaacaatcagctgactttaatttcttct
acagcatttgatgatgtctttgccctcgaagagctggatctgtcgtataataatttagaa
acaattccatgggatgctgttgagaagatggttagcttgcacaccctcagtttggaccac
aatatgattgataacattcctaaggggactttctcccacttgcacaagatgactcggcta
gatgtgacatcaaataaattgcagaagctaccacctgaccctctctttcagagagctcag
gtcctagcaacctcaggaatcataagcccatctactttcgcattaagttttggcggaaac
cctttgcattgcaattgtgaactgctgtggttgagacgtctgtccagagaagatgacctg
gagacctgtgcttctccagcacttttaactggccgctatttttggtccattcctgaggaa
gagtttttgtgtgaacctcctctcattactcggcacacccacgagatgagagtcctggag
ggtcaaagggcaaccctgaggtgcaaagccaggggagaccctgaacctgcaattcactgg
atttctcctgaagggaagcttatttcaaatgcaacaagatctctggtgtatgataatgga
acacttgatattcttataacgactgtgaaggatacaggtgcttttacctgcattgcttcc
aatcctgctggggaggcaacacaaacggtggatcttcatatcattaagctccctcactta
ctaaacagtacgaaccatatccacgagcctgatcctggttcttcagacatctctacgtct
actaagtcaggttctaatgcaagcagtagtaatggtgatactaaaatgagtcaagataaa
attgtggtggcggaagcaacatcatctactgcactacttaaatttaattttcaaagaaat
attccgggaatacgtatgtttcaaatccagtacaatggtacttatgatgacacccttgtt
tacagaatgatacctcctacgagcaaaactttccttgtcaataacctggctgctggaacc
atgtatgacttgtgtgtcttggcaatatatgacgatggcatcacttccctcactgccacc
agagtcgtgggctgcatccagtttactacggagcaggattacgtgcggtgccacttcatg
cagtcccagtttctgggaggcaccatgattattattattggtggaatcatcgtagcctct
gtgctggttttcatcatcattctaatgatccggtataaggtttgtaacaataatgggcaa
cacaaggtcaccaaggtcagcaacgtttactctcaaacaaacggggcccagagccaaggc
tgcagcgggacgctgccccagtctgtgtccaaacaagctgtggggcacgaagagaacgcc
cagtgttgtaaggttgccggtgacagtgtgataccaccgtcagaaacgtgttcgagtcag
gactcctccgccactacctctgctttgcctcctacctggacttcaagcacttctgcgccc
caaaagcagaaaagaaagactggcacaaagccaggtgccgaagcgcagagcgaagccgtc
acaaacgctgagtcccaaaacgtgaacagaaacaactccactgccttgcagttagctagt
cgacctcccgattctgaggggcccgcgtctaaacgagcacattcaaagccaaatgctttg
ccgactaatgttgaccagattgtccaggaaacacagaggccggagttaatctga
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